==1796873== Memcheck, a memory error detector ==1796873== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1796873== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1796873== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCreatingAndUsingANewSrnModelTutorial -malloc_debug -malloc_dump -memory_info ==1796873== Parent PID: 1781628 ==1796873== ==1796873== ==1796873== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1796873== Open file descriptor 12: ==1796873== at 0x1039B07D: pipe (pipe.c:29) ==1796873== by 0x18A2107D: ??? ==1796873== by 0x13FE34CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1796873== by 0xFBBC418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1796873== by 0xFB55D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1796873== by 0xE84CD38: PetscInitialize (pinit.c:924) ==1796873== by 0xE6B4153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1796873== by 0xE6B41A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1796873== by 0x261089: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1796873== by 0x25978B: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1796873== by 0x25E30E: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1796873== by 0x25E1AF: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1796873== by 0x25E845: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1796873== by 0x255DF5: main (TestCreatingAndUsingANewSrnModelTutorial.cpp:19) ==1796873== ==1796873== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1796873== at 0x1039FA1C: __open_nocancel (open64_nocancel.c:39) ==1796873== by 0x10323BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1796873== by 0xE6EE822: ??? ==1796873== by 0xE6EE96F: ??? ==1796873== by 0x1408A6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1796873== by 0x1408A938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1796873== by 0x14040922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1796873== by 0x13FE32DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1796873== by 0xFBBC418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1796873== by 0xFB55D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1796873== by 0xE84CD38: PetscInitialize (pinit.c:924) ==1796873== by 0xE6B4153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1796873== by 0xE6B41A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1796873== by 0x261089: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1796873== by 0x25978B: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1796873== by 0x25E30E: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1796873== by 0x25E1AF: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1796873== by 0x25E845: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1796873== by 0x255DF5: main (TestCreatingAndUsingANewSrnModelTutorial.cpp:19) ==1796873== ==1796873== Open file descriptor 116: ==1796873== ==1796873== ==1796873== Open file descriptor 112: ==1796873== ==1796873== ==1796873== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCreatingAndUsingANewSrnModelTutorial_valgrind.txt ==1796873== ==1796873== ==1796873== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1796873== ==1796873== ==1796873== ==1796873== HEAP SUMMARY: ==1796873== in use at exit: 835,564 bytes in 11,673 blocks ==1796873== total heap usage: 3,826,637 allocs, 3,814,964 frees, 1,711,565,126 bytes allocated ==1796873== ==1796873== LEAK SUMMARY: ==1796873== definitely lost: 0 bytes in 0 blocks ==1796873== indirectly lost: 0 bytes in 0 blocks ==1796873== possibly lost: 0 bytes in 0 blocks ==1796873== still reachable: 56 bytes in 3 blocks ==1796873== suppressed: 835,508 bytes in 11,670 blocks ==1796873== Reachable blocks (those to which a pointer was found) are not shown. ==1796873== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1796873== ==1796873== For lists of detected and suppressed errors, rerun with: -s ==1796873== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)