==1797397== Memcheck, a memory error detector ==1797397== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1797397== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1797397== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestCryptSimulation2dWithMeshBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==1797397== Parent PID: 1781628 ==1797397== ==1797397== ==1797397== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1797397== Open file descriptor 12: ==1797397== at 0x1056307D: pipe (pipe.c:29) ==1797397== by 0x1A6E407D: ??? ==1797397== by 0x158F24CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1797397== by 0x121C0418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1797397== by 0x12159D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1797397== by 0x10E50D38: PetscInitialize (pinit.c:924) ==1797397== by 0xFD31153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1797397== by 0xFD311A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1797397== by 0x23B368: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1797397== by 0x231839: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1797397== by 0x235F6A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1797397== by 0x235E0A: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1797397== by 0x2364A1: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1797397== by 0x22FC55: main (TestCryptSimulation2dWithMeshBasedCellPopulation.cpp:19) ==1797397== ==1797397== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1797397== at 0x10567A1C: __open_nocancel (open64_nocancel.c:39) ==1797397== by 0x104EBBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1797397== by 0xFD6B822: ??? ==1797397== by 0xFD6B96F: ??? ==1797397== by 0x159976DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1797397== by 0x15997938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1797397== by 0x1594D922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1797397== by 0x158F22DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1797397== by 0x121C0418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1797397== by 0x12159D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1797397== by 0x10E50D38: PetscInitialize (pinit.c:924) ==1797397== by 0xFD31153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1797397== by 0xFD311A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1797397== by 0x23B368: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1797397== by 0x231839: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1797397== by 0x235F6A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1797397== by 0x235E0A: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1797397== by 0x2364A1: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1797397== by 0x22FC55: main (TestCryptSimulation2dWithMeshBasedCellPopulation.cpp:19) ==1797397== ==1797397== Open file descriptor 116: ==1797397== ==1797397== ==1797397== Open file descriptor 112: ==1797397== ==1797397== ==1797397== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCryptSimulation2dWithMeshBasedCellPopulation_valgrind.txt ==1797397== ==1797397== ==1797397== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1797397== ==1797397== ==1797397== ==1797397== HEAP SUMMARY: ==1797397== in use at exit: 835,580 bytes in 11,673 blocks ==1797397== total heap usage: 6,374,464 allocs, 6,362,791 frees, 2,260,176,297 bytes allocated ==1797397== ==1797397== LEAK SUMMARY: ==1797397== definitely lost: 0 bytes in 0 blocks ==1797397== indirectly lost: 0 bytes in 0 blocks ==1797397== possibly lost: 0 bytes in 0 blocks ==1797397== still reachable: 56 bytes in 3 blocks ==1797397== suppressed: 835,524 bytes in 11,670 blocks ==1797397== Reachable blocks (those to which a pointer was found) are not shown. ==1797397== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1797397== ==1797397== For lists of detected and suppressed errors, rerun with: -s ==1797397== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)