==1799846== Memcheck, a memory error detector ==1799846== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1799846== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1799846== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestHdf5ToVisualizerConverters -malloc_debug -malloc_dump -memory_info ==1799846== Parent PID: 1781628 ==1799846== ==1799846== ==1799846== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1799846== Open file descriptor 12: ==1799846== at 0xA52B07D: pipe (pipe.c:29) ==1799846== by 0x13F9A07D: ??? ==1799846== by 0xF7B04CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1799846== by 0xBC24418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1799846== by 0xBBBDD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1799846== by 0xA8B4D38: PetscInitialize (pinit.c:924) ==1799846== by 0x9E08153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1799846== by 0x9E081A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1799846== by 0x124324: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1799846== by 0x11DB0D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1799846== by 0x120564: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1799846== by 0x120404: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1799846== by 0x120A9B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1799846== by 0x11BF35: main (TestHdf5ToVisualizerConverters.cpp:19) ==1799846== ==1799846== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1799846== at 0xA52FA1C: __open_nocancel (open64_nocancel.c:39) ==1799846== by 0xA4B3BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1799846== by 0x9E42822: ??? ==1799846== by 0x9E4296F: ??? ==1799846== by 0xF8556DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1799846== by 0xF855938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1799846== by 0xF80B922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1799846== by 0xF7B02DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1799846== by 0xBC24418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1799846== by 0xBBBDD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1799846== by 0xA8B4D38: PetscInitialize (pinit.c:924) ==1799846== by 0x9E08153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1799846== by 0x9E081A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1799846== by 0x124324: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1799846== by 0x11DB0D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1799846== by 0x120564: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1799846== by 0x120404: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1799846== by 0x120A9B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1799846== by 0x11BF35: main (TestHdf5ToVisualizerConverters.cpp:19) ==1799846== ==1799846== Open file descriptor 116: ==1799846== ==1799846== ==1799846== Open file descriptor 112: ==1799846== ==1799846== ==1799846== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestHdf5ToVisualizerConverters_valgrind.txt ==1799846== ==1799846== ==1799846== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1799846== ==1799846== ==1799846== ==1799846== HEAP SUMMARY: ==1799846== in use at exit: 835,617 bytes in 11,676 blocks ==1799846== total heap usage: 131,264 allocs, 119,588 frees, 1,568,808,799 bytes allocated ==1799846== ==1799846== LEAK SUMMARY: ==1799846== definitely lost: 0 bytes in 0 blocks ==1799846== indirectly lost: 0 bytes in 0 blocks ==1799846== possibly lost: 0 bytes in 0 blocks ==1799846== still reachable: 24 bytes in 2 blocks ==1799846== suppressed: 835,593 bytes in 11,674 blocks ==1799846== Reachable blocks (those to which a pointer was found) are not shown. ==1799846== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1799846== ==1799846== For lists of detected and suppressed errors, rerun with: -s ==1799846== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)