==1799739== Memcheck, a memory error detector ==1799739== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1799739== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1799739== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestMonodomainProblem -malloc_debug -malloc_dump -memory_info ==1799739== Parent PID: 1781628 ==1799739== ==1799739== Warning: invalid file descriptor -1 in syscall close() ==1799739== ==1799739== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1799739== Open file descriptor 12: ==1799739== at 0xBD8107D: pipe (pipe.c:29) ==1799739== by 0x13F9A07D: ??? ==1799739== by 0xFC6E4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1799739== by 0xB66F418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1799739== by 0xB608D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1799739== by 0x9F4AD38: PetscInitialize (pinit.c:924) ==1799739== by 0x9DB0153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1799739== by 0x9DB01A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1799739== by 0x14A2B6: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1799739== by 0x14182D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1799739== by 0x144A20: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1799739== by 0x1448C0: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1799739== by 0x144F57: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1799739== by 0x13FC05: main (TestMonodomainProblem.cpp:19) ==1799739== ==1799739== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1799739== at 0xBD85A1C: __open_nocancel (open64_nocancel.c:39) ==1799739== by 0xBD09BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1799739== by 0x9DEA822: ??? ==1799739== by 0x9DEA96F: ??? ==1799739== by 0xFD136DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1799739== by 0xFD13938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1799739== by 0xFCC9922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1799739== by 0xFC6E2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1799739== by 0xB66F418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1799739== by 0xB608D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1799739== by 0x9F4AD38: PetscInitialize (pinit.c:924) ==1799739== by 0x9DB0153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1799739== by 0x9DB01A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1799739== by 0x14A2B6: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1799739== by 0x14182D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1799739== by 0x144A20: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1799739== by 0x1448C0: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1799739== by 0x144F57: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1799739== by 0x13FC05: main (TestMonodomainProblem.cpp:19) ==1799739== ==1799739== Open file descriptor 116: ==1799739== ==1799739== ==1799739== Open file descriptor 112: ==1799739== ==1799739== ==1799739== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestMonodomainProblem_valgrind.txt ==1799739== ==1799739== ==1799739== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1799739== ==1799739== ==1799739== ==1799739== HEAP SUMMARY: ==1799739== in use at exit: 836,028 bytes in 11,682 blocks ==1799739== total heap usage: 6,626,335 allocs, 6,614,653 frees, 4,220,341,481 bytes allocated ==1799739== ==1799739== LEAK SUMMARY: ==1799739== definitely lost: 0 bytes in 0 blocks ==1799739== indirectly lost: 0 bytes in 0 blocks ==1799739== possibly lost: 0 bytes in 0 blocks ==1799739== still reachable: 24 bytes in 2 blocks ==1799739== suppressed: 836,004 bytes in 11,680 blocks ==1799739== Reachable blocks (those to which a pointer was found) are not shown. ==1799739== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1799739== ==1799739== For lists of detected and suppressed errors, rerun with: -s ==1799739== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 128 from 34)