==1783652== Memcheck, a memory error detector ==1783652== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1783652== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1783652== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOffLatticeSimulationWithPdes -malloc_debug -malloc_dump -memory_info ==1783652== Parent PID: 1781628 ==1783652== ==1783652== ==1783652== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1783652== Open file descriptor 12: ==1783652== at 0xF04007D: pipe (pipe.c:29) ==1783652== by 0x18A2107D: ??? ==1783652== by 0x140344CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1783652== by 0x10900418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1783652== by 0x10899D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1783652== by 0xF590D38: PetscInitialize (pinit.c:924) ==1783652== by 0xE80E153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1783652== by 0xE80E1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1783652== by 0x226536: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1783652== by 0x21FB71: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1783652== by 0x2236DC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1783652== by 0x22357C: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1783652== by 0x223C13: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1783652== by 0x21DF55: main (TestOffLatticeSimulationWithPdes.cpp:19) ==1783652== ==1783652== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1783652== at 0xF044A1C: __open_nocancel (open64_nocancel.c:39) ==1783652== by 0xEFC8BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1783652== by 0xE848822: ??? ==1783652== by 0xE84896F: ??? ==1783652== by 0x140D96DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1783652== by 0x140D9938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1783652== by 0x1408F922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1783652== by 0x140342DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1783652== by 0x10900418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1783652== by 0x10899D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1783652== by 0xF590D38: PetscInitialize (pinit.c:924) ==1783652== by 0xE80E153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1783652== by 0xE80E1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1783652== by 0x226536: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1783652== by 0x21FB71: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1783652== by 0x2236DC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1783652== by 0x22357C: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1783652== by 0x223C13: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1783652== by 0x21DF55: main (TestOffLatticeSimulationWithPdes.cpp:19) ==1783652== ==1783652== Open file descriptor 116: ==1783652== ==1783652== ==1783652== Open file descriptor 112: ==1783652== ==1783652== ==1783652== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOffLatticeSimulationWithPdes_valgrind.txt ==1783652== ==1783652== ==1783652== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1783652== ==1783652== ==1783652== ==1783652== HEAP SUMMARY: ==1783652== in use at exit: 835,564 bytes in 11,673 blocks ==1783652== total heap usage: 8,510,598 allocs, 8,498,925 frees, 2,861,638,276 bytes allocated ==1783652== ==1783652== LEAK SUMMARY: ==1783652== definitely lost: 0 bytes in 0 blocks ==1783652== indirectly lost: 0 bytes in 0 blocks ==1783652== possibly lost: 0 bytes in 0 blocks ==1783652== still reachable: 56 bytes in 3 blocks ==1783652== suppressed: 835,508 bytes in 11,670 blocks ==1783652== Reachable blocks (those to which a pointer was found) are not shown. ==1783652== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1783652== ==1783652== For lists of detected and suppressed errors, rerun with: -s ==1783652== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)