==1783982== Memcheck, a memory error detector ==1783982== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1783982== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1783982== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOnLatticeSimulationWithCaBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==1783982== Parent PID: 1781628 ==1783982== ==1783982== ==1783982== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1783982== Open file descriptor 12: ==1783982== at 0xF11F07D: pipe (pipe.c:29) ==1783982== by 0x18A2207D: ??? ==1783982== by 0x141574CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1783982== by 0x10D7C418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1783982== by 0x10D15D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1783982== by 0xFA0CD38: PetscInitialize (pinit.c:924) ==1783982== by 0xE471153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1783982== by 0xE4711A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1783982== by 0x1D3486: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1783982== by 0x1CCDB9: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1783982== by 0x1D0554: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1783982== by 0x1D03F4: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1783982== by 0x1D0A8B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1783982== by 0x1CB1D5: main (TestOnLatticeSimulationWithCaBasedCellPopulation.cpp:19) ==1783982== ==1783982== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1783982== at 0xF123A1C: __open_nocancel (open64_nocancel.c:39) ==1783982== by 0xF0A7BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1783982== by 0xE4AB822: ??? ==1783982== by 0xE4AB96F: ??? ==1783982== by 0x141FC6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1783982== by 0x141FC938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1783982== by 0x141B2922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1783982== by 0x141572DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1783982== by 0x10D7C418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1783982== by 0x10D15D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1783982== by 0xFA0CD38: PetscInitialize (pinit.c:924) ==1783982== by 0xE471153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1783982== by 0xE4711A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1783982== by 0x1D3486: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1783982== by 0x1CCDB9: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1783982== by 0x1D0554: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1783982== by 0x1D03F4: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1783982== by 0x1D0A8B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1783982== by 0x1CB1D5: main (TestOnLatticeSimulationWithCaBasedCellPopulation.cpp:19) ==1783982== ==1783982== Open file descriptor 116: ==1783982== ==1783982== ==1783982== Open file descriptor 112: ==1783982== ==1783982== ==1783982== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOnLatticeSimulationWithCaBasedCellPopulation_valgrind.txt ==1783982== ==1783982== ==1783982== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1783982== ==1783982== ==1783982== ==1783982== HEAP SUMMARY: ==1783982== in use at exit: 835,564 bytes in 11,673 blocks ==1783982== total heap usage: 7,609,694 allocs, 7,598,021 frees, 8,294,441,235 bytes allocated ==1783982== ==1783982== LEAK SUMMARY: ==1783982== definitely lost: 0 bytes in 0 blocks ==1783982== indirectly lost: 0 bytes in 0 blocks ==1783982== possibly lost: 0 bytes in 0 blocks ==1783982== still reachable: 56 bytes in 3 blocks ==1783982== suppressed: 835,508 bytes in 11,670 blocks ==1783982== Reachable blocks (those to which a pointer was found) are not shown. ==1783982== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1783982== ==1783982== For lists of detected and suppressed errors, rerun with: -s ==1783982== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)