==942814== Memcheck, a memory error detector ==942814== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==942814== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==942814== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCellSrn -malloc_debug -malloc_dump -memory_info ==942814== Parent PID: 941643 ==942814== ==942814== ==942814== FILE DESCRIPTORS: 9 open (3 std) at exit. ==942814== Open file descriptor 12: ==942814== at 0xE41107D: pipe (pipe.c:29) ==942814== by 0x18A1D07D: ??? ==942814== by 0x12F724CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==942814== by 0xE060418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==942814== by 0xDFF9D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==942814== by 0xCCCAD38: PetscInitialize (pinit.c:924) ==942814== by 0xCBA0153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==942814== by 0xCBA01A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==942814== by 0x119821: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==942814== by 0x115133: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==942814== by 0x117438: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==942814== by 0x117333: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==942814== by 0x117947: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==942814== by 0x113935: main (TestCellSrn.cpp:18) ==942814== ==942814== Open file descriptor 8: /dev/shm/open_mpi.0000 ==942814== at 0xE415A1C: __open_nocancel (open64_nocancel.c:39) ==942814== by 0xE399BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==942814== by 0xDF54822: ??? ==942814== by 0xDF5496F: ??? ==942814== by 0x130176DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==942814== by 0x13017938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==942814== by 0x12FCD922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==942814== by 0x12F722DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==942814== by 0xE060418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==942814== by 0xDFF9D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==942814== by 0xCCCAD38: PetscInitialize (pinit.c:924) ==942814== by 0xCBA0153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==942814== by 0xCBA01A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==942814== by 0x119821: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==942814== by 0x115133: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==942814== by 0x117438: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==942814== by 0x117333: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==942814== by 0x117947: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==942814== by 0x113935: main (TestCellSrn.cpp:18) ==942814== ==942814== Open file descriptor 115: ==942814== ==942814== ==942814== Open file descriptor 110: ==942814== ==942814== ==942814== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCellSrn_valgrind.txt ==942814== ==942814== ==942814== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==942814== ==942814== ==942814== ==942814== HEAP SUMMARY: ==942814== in use at exit: 995,644 bytes in 13,915 blocks ==942814== total heap usage: 75,465 allocs, 61,550 frees, 1,572,419,162 bytes allocated ==942814== ==942814== LEAK SUMMARY: ==942814== definitely lost: 0 bytes in 0 blocks ==942814== indirectly lost: 0 bytes in 0 blocks ==942814== possibly lost: 0 bytes in 0 blocks ==942814== still reachable: 120 bytes in 4 blocks ==942814== suppressed: 995,524 bytes in 13,911 blocks ==942814== Reachable blocks (those to which a pointer was found) are not shown. ==942814== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==942814== ==942814== For lists of detected and suppressed errors, rerun with: -s ==942814== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)