==942813== Memcheck, a memory error detector ==942813== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==942813== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==942813== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCell -malloc_debug -malloc_dump -memory_info ==942813== Parent PID: 941643 ==942813== ==942813== ==942813== FILE DESCRIPTORS: 9 open (3 std) at exit. ==942813== Open file descriptor 12: ==942813== at 0xE41107D: pipe (pipe.c:29) ==942813== by 0x18A1D07D: ??? ==942813== by 0x12F724CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==942813== by 0xE060418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==942813== by 0xDFF9D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==942813== by 0xCCCAD38: PetscInitialize (pinit.c:924) ==942813== by 0xCBA0153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==942813== by 0xCBA01A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==942813== by 0x1291DB: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==942813== by 0x123ECD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==942813== by 0x126DAA: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==942813== by 0x126C4A: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==942813== by 0x1272E1: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==942813== by 0x1222F5: main (TestCell.cpp:19) ==942813== ==942813== Open file descriptor 8: /dev/shm/open_mpi.0000 ==942813== at 0xE415A1C: __open_nocancel (open64_nocancel.c:39) ==942813== by 0xE399BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==942813== by 0xDF54822: ??? ==942813== by 0xDF5496F: ??? ==942813== by 0x130176DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==942813== by 0x13017938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==942813== by 0x12FCD922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==942813== by 0x12F722DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==942813== by 0xE060418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==942813== by 0xDFF9D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==942813== by 0xCCCAD38: PetscInitialize (pinit.c:924) ==942813== by 0xCBA0153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==942813== by 0xCBA01A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==942813== by 0x1291DB: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==942813== by 0x123ECD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==942813== by 0x126DAA: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==942813== by 0x126C4A: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==942813== by 0x1272E1: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==942813== by 0x1222F5: main (TestCell.cpp:19) ==942813== ==942813== Open file descriptor 115: ==942813== ==942813== ==942813== Open file descriptor 110: ==942813== ==942813== ==942813== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCell_valgrind.txt ==942813== ==942813== ==942813== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==942813== ==942813== ==942813== ==942813== HEAP SUMMARY: ==942813== in use at exit: 995,652 bytes in 13,911 blocks ==942813== total heap usage: 5,195,475 allocs, 5,181,564 frees, 2,052,211,386 bytes allocated ==942813== ==942813== LEAK SUMMARY: ==942813== definitely lost: 0 bytes in 0 blocks ==942813== indirectly lost: 0 bytes in 0 blocks ==942813== possibly lost: 0 bytes in 0 blocks ==942813== still reachable: 184 bytes in 4 blocks ==942813== suppressed: 995,468 bytes in 13,907 blocks ==942813== Reachable blocks (those to which a pointer was found) are not shown. ==942813== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==942813== ==942813== For lists of detected and suppressed errors, rerun with: -s ==942813== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)