==941646== Memcheck, a memory error detector ==941646== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==941646== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==941646== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/global/test/TestCitations -malloc_debug -malloc_dump -memory_info ==941646== Parent PID: 941643 ==941646== ==941646== ==941646== FILE DESCRIPTORS: 9 open (3 std) at exit. ==941646== Open file descriptor 12: ==941646== at 0x4CB407D: pipe (pipe.c:29) ==941646== by 0xAEA607D: ??? ==941646== by 0x89BE4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==941646== by 0x6271418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==941646== by 0x620AD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==941646== by 0x4F01D38: PetscInitialize (pinit.c:924) ==941646== by 0x48FA153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==941646== by 0x48FA1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==941646== by 0x11862B: TestCitations::TestChasteCitation() (TestCitations.hpp:72) ==941646== by 0x118ED8: TestDescription_TestCitations_TestChasteCitation::runTest() (TestCitations.cpp:30) ==941646== by 0x111C4A: CxxTest::RealTestDescription::run() (RealDescriptions.cpp:96) ==941646== by 0x114E74: CxxTest::TestRunner::runTest(CxxTest::TestDescription&) (TestRunner.h:74) ==941646== by 0x114D59: CxxTest::TestRunner::runSuite(CxxTest::SuiteDescription&) (TestRunner.h:61) ==941646== by 0x114BFF: CxxTest::TestRunner::runWorld() (TestRunner.h:46) ==941646== by 0x114AC1: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==941646== by 0x1150D5: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==941646== by 0x110C15: main (TestCitations.cpp:18) ==941646== ==941646== Open file descriptor 8: /dev/shm/open_mpi.0000 ==941646== at 0x4CB8A1C: __open_nocancel (open64_nocancel.c:39) ==941646== by 0x4C3CBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==941646== by 0x492E822: ??? ==941646== by 0x492E96F: ??? ==941646== by 0x8A636DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==941646== by 0x8A63938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==941646== by 0x8A19922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==941646== by 0x89BE2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==941646== by 0x6271418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==941646== by 0x620AD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==941646== by 0x4F01D38: PetscInitialize (pinit.c:924) ==941646== by 0x48FA153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==941646== by 0x48FA1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==941646== by 0x11862B: TestCitations::TestChasteCitation() (TestCitations.hpp:72) ==941646== by 0x118ED8: TestDescription_TestCitations_TestChasteCitation::runTest() (TestCitations.cpp:30) ==941646== by 0x111C4A: CxxTest::RealTestDescription::run() (RealDescriptions.cpp:96) ==941646== by 0x114E74: CxxTest::TestRunner::runTest(CxxTest::TestDescription&) (TestRunner.h:74) ==941646== by 0x114D59: CxxTest::TestRunner::runSuite(CxxTest::SuiteDescription&) (TestRunner.h:61) ==941646== by 0x114BFF: CxxTest::TestRunner::runWorld() (TestRunner.h:46) ==941646== by 0x114AC1: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==941646== by 0x1150D5: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==941646== by 0x110C15: main (TestCitations.cpp:18) ==941646== ==941646== Open file descriptor 115: ==941646== ==941646== ==941646== Open file descriptor 110: ==941646== ==941646== ==941646== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCitations_valgrind.txt ==941646== ==941646== ==941646== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==941646== ==941646== ==941646== ==941646== HEAP SUMMARY: ==941646== in use at exit: 995,068 bytes in 13,913 blocks ==941646== total heap usage: 57,875 allocs, 43,962 frees, 1,571,402,863 bytes allocated ==941646== ==941646== LEAK SUMMARY: ==941646== definitely lost: 0 bytes in 0 blocks ==941646== indirectly lost: 0 bytes in 0 blocks ==941646== possibly lost: 0 bytes in 0 blocks ==941646== still reachable: 24 bytes in 2 blocks ==941646== suppressed: 995,044 bytes in 13,911 blocks ==941646== Reachable blocks (those to which a pointer was found) are not shown. ==941646== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==941646== ==941646== For lists of detected and suppressed errors, rerun with: -s ==941646== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)