==943416== Memcheck, a memory error detector ==943416== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==943416== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==943416== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestPeriodicNodeBasedCellPopulationParallelMethods -malloc_debug -malloc_dump -memory_info ==943416== Parent PID: 941643 ==943416== ==943416== ==943416== FILE DESCRIPTORS: 9 open (3 std) at exit. ==943416== Open file descriptor 12: ==943416== at 0xEC5107D: pipe (pipe.c:29) ==943416== by 0x18A1D07D: ??? ==943416== by 0x140244CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==943416== by 0x108F2418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==943416== by 0x1088BD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==943416== by 0xF582D38: PetscInitialize (pinit.c:924) ==943416== by 0xE46B153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==943416== by 0xE46B1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==943416== by 0x12B4BA: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==943416== by 0x1266B3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==943416== by 0x128CBE: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==943416== by 0x128BBA: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==943416== by 0x1291CD: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==943416== by 0x124EB5: main (TestPeriodicNodeBasedCellPopulationParallelMethods.cpp:18) ==943416== ==943416== Open file descriptor 8: /dev/shm/open_mpi.0000 ==943416== at 0xEC55A1C: __open_nocancel (open64_nocancel.c:39) ==943416== by 0xEBD9BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==943416== by 0xE49F822: ??? ==943416== by 0xE49F96F: ??? ==943416== by 0x140C96DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==943416== by 0x140C9938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==943416== by 0x1407F922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==943416== by 0x140242DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==943416== by 0x108F2418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==943416== by 0x1088BD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==943416== by 0xF582D38: PetscInitialize (pinit.c:924) ==943416== by 0xE46B153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==943416== by 0xE46B1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==943416== by 0x12B4BA: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==943416== by 0x1266B3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==943416== by 0x128CBE: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==943416== by 0x128BBA: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==943416== by 0x1291CD: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==943416== by 0x124EB5: main (TestPeriodicNodeBasedCellPopulationParallelMethods.cpp:18) ==943416== ==943416== Open file descriptor 115: ==943416== ==943416== ==943416== Open file descriptor 110: ==943416== ==943416== ==943416== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestPeriodicNodeBasedCellPopulationParallelMethods_valgrind.txt ==943416== ==943416== ==943416== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==943416== ==943416== ==943416== ==943416== HEAP SUMMARY: ==943416== in use at exit: 995,580 bytes in 13,914 blocks ==943416== total heap usage: 65,195 allocs, 51,281 frees, 1,571,932,167 bytes allocated ==943416== ==943416== LEAK SUMMARY: ==943416== definitely lost: 0 bytes in 0 blocks ==943416== indirectly lost: 0 bytes in 0 blocks ==943416== possibly lost: 0 bytes in 0 blocks ==943416== still reachable: 56 bytes in 3 blocks ==943416== suppressed: 995,524 bytes in 13,911 blocks ==943416== Reachable blocks (those to which a pointer was found) are not shown. ==943416== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==943416== ==943416== For lists of detected and suppressed errors, rerun with: -s ==943416== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)