==1818369== Memcheck, a memory error detector ==1818369== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1818369== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1818369== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCellwiseDataGradient -malloc_debug -malloc_dump -memory_info ==1818369== Parent PID: 1816752 ==1818369== ==1818369== ==1818369== FILE DESCRIPTORS: 10 open (3 std) at exit. ==1818369== Open file descriptor 12: ==1818369== at 0xEB7207D: pipe (pipe.c:29) ==1818369== by 0x18A1C07D: ??? ==1818369== by 0x1402D4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1818369== by 0x10813418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1818369== by 0x107ACD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1818369== by 0xF4A3D38: PetscInitialize (pinit.c:924) ==1818369== by 0xE46B153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1818369== by 0xE46B1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1818369== by 0x11DD52: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1818369== by 0x119493: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1818369== by 0x11B86C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1818369== by 0x11B767: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1818369== by 0x11BD7B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1818369== by 0x117C95: main (TestCellwiseDataGradient.cpp:18) ==1818369== ==1818369== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1818369== at 0xEB76A1C: __open_nocancel (open64_nocancel.c:39) ==1818369== by 0xEAFABCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1818369== by 0xE4A5822: ??? ==1818369== by 0xE4A596F: ??? ==1818369== by 0x140D26DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1818369== by 0x140D2938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1818369== by 0x14088922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1818369== by 0x1402D2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1818369== by 0x10813418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1818369== by 0x107ACD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1818369== by 0xF4A3D38: PetscInitialize (pinit.c:924) ==1818369== by 0xE46B153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1818369== by 0xE46B1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1818369== by 0x11DD52: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1818369== by 0x119493: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1818369== by 0x11B86C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1818369== by 0x11B767: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1818369== by 0x11BD7B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1818369== by 0x117C95: main (TestCellwiseDataGradient.cpp:18) ==1818369== ==1818369== Open file descriptor 118: ==1818369== ==1818369== ==1818369== Open file descriptor 115: ==1818369== ==1818369== ==1818369== Open file descriptor 113: /usr/share/ca-certificates/mozilla/D-TRUST_Root_Class_3_CA_2_2009.crt ==1818369== ==1818369== ==1818369== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCellwiseDataGradient_valgrind.txt ==1818369== ==1818369== ==1818369== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1818369== ==1818369== ==1818369== ==1818369== HEAP SUMMARY: ==1818369== in use at exit: 835,633 bytes in 11,677 blocks ==1818369== total heap usage: 426,697 allocs, 415,020 frees, 1,555,353,242 bytes allocated ==1818369== ==1818369== LEAK SUMMARY: ==1818369== definitely lost: 0 bytes in 0 blocks ==1818369== indirectly lost: 0 bytes in 0 blocks ==1818369== possibly lost: 0 bytes in 0 blocks ==1818369== still reachable: 56 bytes in 3 blocks ==1818369== suppressed: 835,577 bytes in 11,674 blocks ==1818369== Reachable blocks (those to which a pointer was found) are not shown. ==1818369== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1818369== ==1818369== For lists of detected and suppressed errors, rerun with: -s ==1818369== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)