==1831953== Memcheck, a memory error detector ==1831953== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1831953== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1831953== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCreatingAndUsingANewSrnModelTutorial -malloc_debug -malloc_dump -memory_info ==1831953== Parent PID: 1816752 ==1831953== ==1831953== ==1831953== FILE DESCRIPTORS: 10 open (3 std) at exit. ==1831953== Open file descriptor 12: ==1831953== at 0x1039507D: pipe (pipe.c:29) ==1831953== by 0x18A1B07D: ??? ==1831953== by 0x13FE14CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1831953== by 0xFBB6418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1831953== by 0xFB4FD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1831953== by 0xE846D38: PetscInitialize (pinit.c:924) ==1831953== by 0xE6AE153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1831953== by 0xE6AE1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1831953== by 0x261089: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1831953== by 0x25978B: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1831953== by 0x25E30E: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1831953== by 0x25E1AF: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1831953== by 0x25E845: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1831953== by 0x255DF5: main (TestCreatingAndUsingANewSrnModelTutorial.cpp:19) ==1831953== ==1831953== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1831953== at 0x10399A1C: __open_nocancel (open64_nocancel.c:39) ==1831953== by 0x1031DBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1831953== by 0xE6E8822: ??? ==1831953== by 0xE6E896F: ??? ==1831953== by 0x140866DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1831953== by 0x14086938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1831953== by 0x1403C922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1831953== by 0x13FE12DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1831953== by 0xFBB6418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1831953== by 0xFB4FD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1831953== by 0xE846D38: PetscInitialize (pinit.c:924) ==1831953== by 0xE6AE153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1831953== by 0xE6AE1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1831953== by 0x261089: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1831953== by 0x25978B: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1831953== by 0x25E30E: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1831953== by 0x25E1AF: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1831953== by 0x25E845: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1831953== by 0x255DF5: main (TestCreatingAndUsingANewSrnModelTutorial.cpp:19) ==1831953== ==1831953== Open file descriptor 118: ==1831953== ==1831953== ==1831953== Open file descriptor 115: ==1831953== ==1831953== ==1831953== Open file descriptor 113: /usr/share/ca-certificates/mozilla/D-TRUST_Root_Class_3_CA_2_2009.crt ==1831953== ==1831953== ==1831953== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCreatingAndUsingANewSrnModelTutorial_valgrind.txt ==1831953== ==1831953== ==1831953== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1831953== ==1831953== ==1831953== ==1831953== HEAP SUMMARY: ==1831953== in use at exit: 835,564 bytes in 11,673 blocks ==1831953== total heap usage: 3,826,638 allocs, 3,814,965 frees, 1,711,565,627 bytes allocated ==1831953== ==1831953== LEAK SUMMARY: ==1831953== definitely lost: 0 bytes in 0 blocks ==1831953== indirectly lost: 0 bytes in 0 blocks ==1831953== possibly lost: 0 bytes in 0 blocks ==1831953== still reachable: 56 bytes in 3 blocks ==1831953== suppressed: 835,508 bytes in 11,670 blocks ==1831953== Reachable blocks (those to which a pointer was found) are not shown. ==1831953== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1831953== ==1831953== For lists of detected and suppressed errors, rerun with: -s ==1831953== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)