==1818240== Memcheck, a memory error detector ==1818240== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1818240== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1818240== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestGoldbeter1991OdeSystem -malloc_debug -malloc_dump -memory_info ==1818240== Parent PID: 1816752 ==1818240== ==1818240== ==1818240== FILE DESCRIPTORS: 10 open (3 std) at exit. ==1818240== Open file descriptor 12: ==1818240== at 0xE6A007D: pipe (pipe.c:29) ==1818240== by 0x18A1B07D: ??? ==1818240== by 0x12FCB4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1818240== by 0xE2ED418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1818240== by 0xE286D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1818240== by 0xCF7DD38: PetscInitialize (pinit.c:924) ==1818240== by 0xCDE5153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1818240== by 0xCDE51A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1818240== by 0x124157: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1818240== by 0x11F6A3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1818240== by 0x121BF4: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1818240== by 0x121AF0: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1818240== by 0x122103: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1818240== by 0x11DEA5: main (TestGoldbeter1991OdeSystem.cpp:18) ==1818240== ==1818240== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1818240== at 0xE6A4A1C: __open_nocancel (open64_nocancel.c:39) ==1818240== by 0xE628BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1818240== by 0xCE1F822: ??? ==1818240== by 0xCE1F96F: ??? ==1818240== by 0x130706DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1818240== by 0x13070938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1818240== by 0x13026922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1818240== by 0x12FCB2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1818240== by 0xE2ED418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1818240== by 0xE286D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1818240== by 0xCF7DD38: PetscInitialize (pinit.c:924) ==1818240== by 0xCDE5153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1818240== by 0xCDE51A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1818240== by 0x124157: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1818240== by 0x11F6A3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1818240== by 0x121BF4: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1818240== by 0x121AF0: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1818240== by 0x122103: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1818240== by 0x11DEA5: main (TestGoldbeter1991OdeSystem.cpp:18) ==1818240== ==1818240== Open file descriptor 118: ==1818240== ==1818240== ==1818240== Open file descriptor 115: ==1818240== ==1818240== ==1818240== Open file descriptor 113: /usr/share/ca-certificates/mozilla/D-TRUST_Root_Class_3_CA_2_2009.crt ==1818240== ==1818240== ==1818240== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestGoldbeter1991OdeSystem_valgrind.txt ==1818240== ==1818240== ==1818240== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1818240== ==1818240== ==1818240== ==1818240== HEAP SUMMARY: ==1818240== in use at exit: 835,601 bytes in 11,676 blocks ==1818240== total heap usage: 71,061 allocs, 59,385 frees, 1,541,657,038 bytes allocated ==1818240== ==1818240== LEAK SUMMARY: ==1818240== definitely lost: 0 bytes in 0 blocks ==1818240== indirectly lost: 0 bytes in 0 blocks ==1818240== possibly lost: 0 bytes in 0 blocks ==1818240== still reachable: 24 bytes in 2 blocks ==1818240== suppressed: 835,577 bytes in 11,674 blocks ==1818240== Reachable blocks (those to which a pointer was found) are not shown. ==1818240== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1818240== ==1818240== For lists of detected and suppressed errors, rerun with: -s ==1818240== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 38 from 38)