==1832502== Memcheck, a memory error detector ==1832502== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1832502== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1832502== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestVertexBasedCellPopulationForCrypt -malloc_debug -malloc_dump -memory_info ==1832502== Parent PID: 1816752 ==1832502== ==1832502== ==1832502== FILE DESCRIPTORS: 10 open (3 std) at exit. ==1832502== Open file descriptor 12: ==1832502== at 0x118E907D: pipe (pipe.c:29) ==1832502== by 0x1A6DC07D: ??? ==1832502== by 0x158524CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1832502== by 0x111F1418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1832502== by 0x1118AD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1832502== by 0xFE53D38: PetscInitialize (pinit.c:924) ==1832502== by 0xFD2B153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1832502== by 0xFD2B1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1832502== by 0x11D953: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1832502== by 0x119133: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1832502== by 0x11B52C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1832502== by 0x11B427: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1832502== by 0x11BA3B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1832502== by 0x117935: main (TestVertexBasedCellPopulationForCrypt.cpp:18) ==1832502== ==1832502== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1832502== at 0x118EDA1C: __open_nocancel (open64_nocancel.c:39) ==1832502== by 0x11871BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1832502== by 0x110E3822: ??? ==1832502== by 0x110E396F: ??? ==1832502== by 0x158F76DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1832502== by 0x158F7938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1832502== by 0x158AD922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1832502== by 0x158522DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1832502== by 0x111F1418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1832502== by 0x1118AD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1832502== by 0xFE53D38: PetscInitialize (pinit.c:924) ==1832502== by 0xFD2B153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1832502== by 0xFD2B1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1832502== by 0x11D953: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1832502== by 0x119133: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1832502== by 0x11B52C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1832502== by 0x11B427: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1832502== by 0x11BA3B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1832502== by 0x117935: main (TestVertexBasedCellPopulationForCrypt.cpp:18) ==1832502== ==1832502== Open file descriptor 118: ==1832502== ==1832502== ==1832502== Open file descriptor 115: ==1832502== ==1832502== ==1832502== Open file descriptor 113: /usr/share/ca-certificates/mozilla/D-TRUST_Root_Class_3_CA_2_2009.crt ==1832502== ==1832502== ==1832502== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestVertexBasedCellPopulationForCrypt_valgrind.txt ==1832502== ==1832502== ==1832502== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1832502== ==1832502== ==1832502== ==1832502== HEAP SUMMARY: ==1832502== in use at exit: 835,729 bytes in 11,678 blocks ==1832502== total heap usage: 61,746 allocs, 50,068 frees, 1,540,658,187 bytes allocated ==1832502== ==1832502== LEAK SUMMARY: ==1832502== definitely lost: 0 bytes in 0 blocks ==1832502== indirectly lost: 0 bytes in 0 blocks ==1832502== possibly lost: 0 bytes in 0 blocks ==1832502== still reachable: 136 bytes in 4 blocks ==1832502== suppressed: 835,593 bytes in 11,674 blocks ==1832502== Reachable blocks (those to which a pointer was found) are not shown. ==1832502== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1832502== ==1832502== For lists of detected and suppressed errors, rerun with: -s ==1832502== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 38 from 38)