==1853163== Memcheck, a memory error detector ==1853163== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1853163== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1853163== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOdeBasedCellCycleModels -malloc_debug -malloc_dump -memory_info ==1853163== Parent PID: 1851961 ==1853163== ==1853163== ==1853163== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1853163== Open file descriptor 12: ==1853163== at 0xE6A007D: pipe (pipe.c:29) ==1853163== by 0x18A1B07D: ??? ==1853163== by 0x12FCB4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1853163== by 0xE2ED418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1853163== by 0xE286D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1853163== by 0xCF7DD38: PetscInitialize (pinit.c:924) ==1853163== by 0xCDE5153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1853163== by 0xCDE51A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1853163== by 0x1361D7: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1853163== by 0x12EF6F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1853163== by 0x131C2A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1853163== by 0x131ACA: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1853163== by 0x132161: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1853163== by 0x12B8A5: main (TestOdeBasedCellCycleModels.cpp:19) ==1853163== ==1853163== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1853163== at 0xE6A4A1C: __open_nocancel (open64_nocancel.c:39) ==1853163== by 0xE628BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1853163== by 0xCE1F822: ??? ==1853163== by 0xCE1F96F: ??? ==1853163== by 0x130706DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1853163== by 0x13070938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1853163== by 0x13026922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1853163== by 0x12FCB2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1853163== by 0xE2ED418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1853163== by 0xE286D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1853163== by 0xCF7DD38: PetscInitialize (pinit.c:924) ==1853163== by 0xCDE5153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1853163== by 0xCDE51A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1853163== by 0x1361D7: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1853163== by 0x12EF6F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1853163== by 0x131C2A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1853163== by 0x131ACA: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1853163== by 0x132161: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1853163== by 0x12B8A5: main (TestOdeBasedCellCycleModels.cpp:19) ==1853163== ==1853163== Open file descriptor 116: ==1853163== ==1853163== ==1853163== Open file descriptor 112: ==1853163== ==1853163== ==1853163== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOdeBasedCellCycleModels_valgrind.txt ==1853163== ==1853163== ==1853163== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1853163== ==1853163== ==1853163== ==1853163== HEAP SUMMARY: ==1853163== in use at exit: 835,580 bytes in 11,674 blocks ==1853163== total heap usage: 4,187,150 allocs, 4,175,476 frees, 1,971,772,889 bytes allocated ==1853163== ==1853163== LEAK SUMMARY: ==1853163== definitely lost: 0 bytes in 0 blocks ==1853163== indirectly lost: 0 bytes in 0 blocks ==1853163== possibly lost: 0 bytes in 0 blocks ==1853163== still reachable: 72 bytes in 4 blocks ==1853163== suppressed: 835,508 bytes in 11,670 blocks ==1853163== Reachable blocks (those to which a pointer was found) are not shown. ==1853163== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1853163== ==1853163== For lists of detected and suppressed errors, rerun with: -s ==1853163== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)