==1868013== Memcheck, a memory error detector ==1868013== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1868013== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1868013== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestRunningVertexBasedCryptSimulationsTutorial -malloc_debug -malloc_dump -memory_info ==1868013== Parent PID: 1851961 ==1868013== ==1868013== ==1868013== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1868013== Open file descriptor 12: ==1868013== at 0x118E907D: pipe (pipe.c:29) ==1868013== by 0x1A6DC07D: ??? ==1868013== by 0x158524CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1868013== by 0x111F1418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1868013== by 0x1118AD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1868013== by 0xFE53D38: PetscInitialize (pinit.c:924) ==1868013== by 0xFD2B153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1868013== by 0xFD2B1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1868013== by 0x11FDA3: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1868013== by 0x11B613: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1868013== by 0x11D8AE: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1868013== by 0x11D7AA: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1868013== by 0x11DDBD: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1868013== by 0x119E15: main (TestRunningVertexBasedCryptSimulationsTutorial.cpp:18) ==1868013== ==1868013== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1868013== at 0x118EDA1C: __open_nocancel (open64_nocancel.c:39) ==1868013== by 0x11871BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1868013== by 0x110E3822: ??? ==1868013== by 0x110E396F: ??? ==1868013== by 0x158F76DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1868013== by 0x158F7938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1868013== by 0x158AD922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1868013== by 0x158522DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1868013== by 0x111F1418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1868013== by 0x1118AD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1868013== by 0xFE53D38: PetscInitialize (pinit.c:924) ==1868013== by 0xFD2B153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1868013== by 0xFD2B1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1868013== by 0x11FDA3: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1868013== by 0x11B613: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1868013== by 0x11D8AE: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1868013== by 0x11D7AA: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1868013== by 0x11DDBD: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1868013== by 0x119E15: main (TestRunningVertexBasedCryptSimulationsTutorial.cpp:18) ==1868013== ==1868013== Open file descriptor 116: ==1868013== ==1868013== ==1868013== Open file descriptor 112: ==1868013== ==1868013== ==1868013== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestRunningVertexBasedCryptSimulationsTutorial_valgrind.txt ==1868013== ==1868013== ==1868013== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1868013== ==1868013== ==1868013== ==1868013== HEAP SUMMARY: ==1868013== in use at exit: 835,729 bytes in 11,678 blocks ==1868013== total heap usage: 1,626,646 allocs, 1,614,968 frees, 1,660,462,683 bytes allocated ==1868013== ==1868013== LEAK SUMMARY: ==1868013== definitely lost: 0 bytes in 0 blocks ==1868013== indirectly lost: 0 bytes in 0 blocks ==1868013== possibly lost: 0 bytes in 0 blocks ==1868013== still reachable: 136 bytes in 4 blocks ==1868013== suppressed: 835,593 bytes in 11,674 blocks ==1868013== Reachable blocks (those to which a pointer was found) are not shown. ==1868013== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1868013== ==1868013== For lists of detected and suppressed errors, rerun with: -s ==1868013== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)