==978541== Memcheck, a memory error detector ==978541== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==978541== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==978541== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCellMutationStates -malloc_debug -malloc_dump -memory_info ==978541== Parent PID: 977326 ==978541== ==978541== ==978541== FILE DESCRIPTORS: 9 open (3 std) at exit. ==978541== Open file descriptor 12: ==978541== at 0xE45307D: pipe (pipe.c:29) ==978541== by 0x18A1D07D: ??? ==978541== by 0x12F724CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==978541== by 0xE0A2418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==978541== by 0xE03BD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==978541== by 0xCD32D38: PetscInitialize (pinit.c:924) ==978541== by 0xCBA0153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==978541== by 0xCBA01A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==978541== by 0x12BE69: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==978541== by 0x126E09: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==978541== by 0x129792: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==978541== by 0x129632: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==978541== by 0x129CC9: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==978541== by 0x125225: main (TestCellMutationStates.cpp:19) ==978541== ==978541== Open file descriptor 8: /dev/shm/open_mpi.0000 ==978541== at 0xE457A1C: __open_nocancel (open64_nocancel.c:39) ==978541== by 0xE3DBBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==978541== by 0xCBD4822: ??? ==978541== by 0xCBD496F: ??? ==978541== by 0x130176DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==978541== by 0x13017938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==978541== by 0x12FCD922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==978541== by 0x12F722DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==978541== by 0xE0A2418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==978541== by 0xE03BD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==978541== by 0xCD32D38: PetscInitialize (pinit.c:924) ==978541== by 0xCBA0153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==978541== by 0xCBA01A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==978541== by 0x12BE69: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==978541== by 0x126E09: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==978541== by 0x129792: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==978541== by 0x129632: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==978541== by 0x129CC9: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==978541== by 0x125225: main (TestCellMutationStates.cpp:19) ==978541== ==978541== Open file descriptor 115: ==978541== ==978541== ==978541== Open file descriptor 110: ==978541== ==978541== ==978541== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCellMutationStates_valgrind.txt ==978541== ==978541== ==978541== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==978541== ==978541== ==978541== ==978541== HEAP SUMMARY: ==978541== in use at exit: 995,580 bytes in 13,914 blocks ==978541== total heap usage: 65,283 allocs, 51,369 frees, 1,571,954,345 bytes allocated ==978541== ==978541== LEAK SUMMARY: ==978541== definitely lost: 0 bytes in 0 blocks ==978541== indirectly lost: 0 bytes in 0 blocks ==978541== possibly lost: 0 bytes in 0 blocks ==978541== still reachable: 56 bytes in 3 blocks ==978541== suppressed: 995,524 bytes in 13,911 blocks ==978541== Reachable blocks (those to which a pointer was found) are not shown. ==978541== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==978541== ==978541== For lists of detected and suppressed errors, rerun with: -s ==978541== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 40 from 40)