==991313== Memcheck, a memory error detector ==991313== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==991313== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==991313== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCreatingAndUsingANewCellBasedSimulationModifierTutorial -malloc_debug -malloc_dump -memory_info ==991313== Parent PID: 977326 ==991313== ==991313== ==991313== FILE DESCRIPTORS: 9 open (3 std) at exit. ==991313== Open file descriptor 12: ==991313== at 0x1006307D: pipe (pipe.c:29) ==991313== by 0x18A1D07D: ??? ==991313== by 0x13F844CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==991313== by 0xF96B418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==991313== by 0xF904D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==991313== by 0xE5FBD38: PetscInitialize (pinit.c:924) ==991313== by 0xE46B153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==991313== by 0xE46B1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==991313== by 0x13161D: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==991313== by 0x12C98F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==991313== by 0x12EEE0: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==991313== by 0x12EDDB: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==991313== by 0x12F3EF: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==991313== by 0x12B185: main (TestCreatingAndUsingANewCellBasedSimulationModifierTutorial.cpp:18) ==991313== ==991313== Open file descriptor 8: /dev/shm/open_mpi.0000 ==991313== at 0x10067A1C: __open_nocancel (open64_nocancel.c:39) ==991313== by 0xFFEBBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==991313== by 0xE49F822: ??? ==991313== by 0xE49F96F: ??? ==991313== by 0x1402B6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==991313== by 0x1402B938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==991313== by 0x13FE1922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==991313== by 0x13F842DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==991313== by 0xF96B418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==991313== by 0xF904D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==991313== by 0xE5FBD38: PetscInitialize (pinit.c:924) ==991313== by 0xE46B153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==991313== by 0xE46B1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==991313== by 0x13161D: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==991313== by 0x12C98F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==991313== by 0x12EEE0: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==991313== by 0x12EDDB: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==991313== by 0x12F3EF: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==991313== by 0x12B185: main (TestCreatingAndUsingANewCellBasedSimulationModifierTutorial.cpp:18) ==991313== ==991313== Open file descriptor 115: ==991313== ==991313== ==991313== Open file descriptor 110: ==991313== ==991313== ==991313== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCreatingAndUsingANewCellBasedSimulationModifierTutorial_valgrind.txt ==991313== ==991313== ==991313== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==991313== ==991313== ==991313== ==991313== HEAP SUMMARY: ==991313== in use at exit: 995,580 bytes in 13,914 blocks ==991313== total heap usage: 528,848 allocs, 514,934 frees, 1,885,384,186 bytes allocated ==991313== ==991313== LEAK SUMMARY: ==991313== definitely lost: 0 bytes in 0 blocks ==991313== indirectly lost: 0 bytes in 0 blocks ==991313== possibly lost: 0 bytes in 0 blocks ==991313== still reachable: 56 bytes in 3 blocks ==991313== suppressed: 995,524 bytes in 13,911 blocks ==991313== Reachable blocks (those to which a pointer was found) are not shown. ==991313== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==991313== ==991313== For lists of detected and suppressed errors, rerun with: -s ==991313== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)