==993811== Memcheck, a memory error detector ==993811== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==993811== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==993811== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestCryptSimulation2dWithMeshBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==993811== Parent PID: 977326 ==993811== ==993811== ==993811== FILE DESCRIPTORS: 9 open (3 std) at exit. ==993811== Open file descriptor 12: ==993811== at 0x1055507D: pipe (pipe.c:29) ==993811== by 0x1A6DF07D: ??? ==993811== by 0x158F04CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==993811== by 0x121B2418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==993811== by 0x1214BD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==993811== by 0x10E42D38: PetscInitialize (pinit.c:924) ==993811== by 0xFD2B153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==993811== by 0xFD2B1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==993811== by 0x23B368: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==993811== by 0x231839: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==993811== by 0x235F6A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==993811== by 0x235E0A: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==993811== by 0x2364A1: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==993811== by 0x22FC55: main (TestCryptSimulation2dWithMeshBasedCellPopulation.cpp:19) ==993811== ==993811== Open file descriptor 8: /dev/shm/open_mpi.0000 ==993811== at 0x10559A1C: __open_nocancel (open64_nocancel.c:39) ==993811== by 0x104DDBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==993811== by 0xFD5F822: ??? ==993811== by 0xFD5F96F: ??? ==993811== by 0x159956DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==993811== by 0x15995938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==993811== by 0x1594B922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==993811== by 0x158F02DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==993811== by 0x121B2418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==993811== by 0x1214BD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==993811== by 0x10E42D38: PetscInitialize (pinit.c:924) ==993811== by 0xFD2B153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==993811== by 0xFD2B1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==993811== by 0x23B368: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==993811== by 0x231839: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==993811== by 0x235F6A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==993811== by 0x235E0A: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==993811== by 0x2364A1: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==993811== by 0x22FC55: main (TestCryptSimulation2dWithMeshBasedCellPopulation.cpp:19) ==993811== ==993811== Open file descriptor 115: ==993811== ==993811== ==993811== Open file descriptor 110: ==993811== ==993811== ==993811== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCryptSimulation2dWithMeshBasedCellPopulation_valgrind.txt ==993811== ==993811== ==993811== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==993811== ==993811== ==993811== ==993811== HEAP SUMMARY: ==993811== in use at exit: 995,540 bytes in 13,910 blocks ==993811== total heap usage: 6,323,538 allocs, 6,309,628 frees, 2,290,793,646 bytes allocated ==993811== ==993811== LEAK SUMMARY: ==993811== definitely lost: 0 bytes in 0 blocks ==993811== indirectly lost: 0 bytes in 0 blocks ==993811== possibly lost: 0 bytes in 0 blocks ==993811== still reachable: 56 bytes in 3 blocks ==993811== suppressed: 995,484 bytes in 13,907 blocks ==993811== Reachable blocks (those to which a pointer was found) are not shown. ==993811== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==993811== ==993811== For lists of detected and suppressed errors, rerun with: -s ==993811== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)