==979681== Memcheck, a memory error detector ==979681== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==979681== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==979681== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestMutableVertexMeshOperationsWithPopulationSrn -malloc_debug -malloc_dump -memory_info ==979681== Parent PID: 977326 ==979681== ==979681== ==979681== FILE DESCRIPTORS: 9 open (3 std) at exit. ==979681== Open file descriptor 12: ==979681== at 0x1002107D: pipe (pipe.c:29) ==979681== by 0x18A1D07D: ??? ==979681== by 0x13F844CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==979681== by 0xF929418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==979681== by 0xF8C2D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==979681== by 0xE593D38: PetscInitialize (pinit.c:924) ==979681== by 0xE46B153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==979681== by 0xE46B1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==979681== by 0x12FA43: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==979681== by 0x12AAD3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==979681== by 0x12D2E4: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==979681== by 0x12D1E0: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==979681== by 0x12D7F3: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==979681== by 0x1292D5: main (TestMutableVertexMeshOperationsWithPopulationSrn.cpp:18) ==979681== ==979681== Open file descriptor 8: /dev/shm/open_mpi.0000 ==979681== at 0x10025A1C: __open_nocancel (open64_nocancel.c:39) ==979681== by 0xFFA9BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==979681== by 0xF81D822: ??? ==979681== by 0xF81D96F: ??? ==979681== by 0x140296DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==979681== by 0x14029938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==979681== by 0x13FDF922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==979681== by 0x13F842DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==979681== by 0xF929418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==979681== by 0xF8C2D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==979681== by 0xE593D38: PetscInitialize (pinit.c:924) ==979681== by 0xE46B153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==979681== by 0xE46B1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==979681== by 0x12FA43: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==979681== by 0x12AAD3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==979681== by 0x12D2E4: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==979681== by 0x12D1E0: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==979681== by 0x12D7F3: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==979681== by 0x1292D5: main (TestMutableVertexMeshOperationsWithPopulationSrn.cpp:18) ==979681== ==979681== Open file descriptor 115: ==979681== ==979681== ==979681== Open file descriptor 110: ==979681== ==979681== ==979681== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestMutableVertexMeshOperationsWithPopulationSrn_valgrind.txt ==979681== ==979681== ==979681== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==979681== ==979681== ==979681== ==979681== HEAP SUMMARY: ==979681== in use at exit: 995,580 bytes in 13,914 blocks ==979681== total heap usage: 72,922 allocs, 59,008 frees, 1,572,339,887 bytes allocated ==979681== ==979681== LEAK SUMMARY: ==979681== definitely lost: 0 bytes in 0 blocks ==979681== indirectly lost: 0 bytes in 0 blocks ==979681== possibly lost: 0 bytes in 0 blocks ==979681== still reachable: 56 bytes in 3 blocks ==979681== suppressed: 995,524 bytes in 13,911 blocks ==979681== Reachable blocks (those to which a pointer was found) are not shown. ==979681== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==979681== ==979681== For lists of detected and suppressed errors, rerun with: -s ==979681== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)