==980170== Memcheck, a memory error detector ==980170== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==980170== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==980170== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOffLatticeSimulationWithVertexBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==980170== Parent PID: 977326 ==980170== ==980170== ==980170== FILE DESCRIPTORS: 9 open (3 std) at exit. ==980170== Open file descriptor 12: ==980170== at 0x1014A07D: pipe (pipe.c:29) ==980170== by 0x18A1D07D: ??? ==980170== by 0x13F844CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==980170== by 0xF96B418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==980170== by 0xF904D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==980170== by 0xE5FBD38: PetscInitialize (pinit.c:924) ==980170== by 0xE46B153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==980170== by 0xE46B1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==980170== by 0x1FFF0F: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==980170== by 0x1F9AB9: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==980170== by 0x1FD424: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==980170== by 0x1FD2C4: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==980170== by 0x1FD95B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==980170== by 0x1F7ED5: main (TestOffLatticeSimulationWithVertexBasedCellPopulation.cpp:19) ==980170== ==980170== Open file descriptor 8: /dev/shm/open_mpi.0000 ==980170== at 0x1014EA1C: __open_nocancel (open64_nocancel.c:39) ==980170== by 0x100D2BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==980170== by 0xE49F822: ??? ==980170== by 0xE49F96F: ??? ==980170== by 0x1402B6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==980170== by 0x1402B938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==980170== by 0x13FE1922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==980170== by 0x13F842DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==980170== by 0xF96B418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==980170== by 0xF904D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==980170== by 0xE5FBD38: PetscInitialize (pinit.c:924) ==980170== by 0xE46B153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==980170== by 0xE46B1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==980170== by 0x1FFF0F: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==980170== by 0x1F9AB9: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==980170== by 0x1FD424: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==980170== by 0x1FD2C4: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==980170== by 0x1FD95B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==980170== by 0x1F7ED5: main (TestOffLatticeSimulationWithVertexBasedCellPopulation.cpp:19) ==980170== ==980170== Open file descriptor 115: ==980170== ==980170== ==980170== Open file descriptor 110: ==980170== ==980170== ==980170== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOffLatticeSimulationWithVertexBasedCellPopulation_valgrind.txt ==980170== ==980170== ==980170== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==980170== ==980170== ==980170== ==980170== HEAP SUMMARY: ==980170== in use at exit: 995,524 bytes in 13,910 blocks ==980170== total heap usage: 9,761,688 allocs, 9,747,778 frees, 2,834,810,674 bytes allocated ==980170== ==980170== LEAK SUMMARY: ==980170== definitely lost: 0 bytes in 0 blocks ==980170== indirectly lost: 0 bytes in 0 blocks ==980170== possibly lost: 0 bytes in 0 blocks ==980170== still reachable: 56 bytes in 3 blocks ==980170== suppressed: 995,468 bytes in 13,907 blocks ==980170== Reachable blocks (those to which a pointer was found) are not shown. ==980170== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==980170== ==980170== For lists of detected and suppressed errors, rerun with: -s ==980170== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 39 from 39)