==993378== Memcheck, a memory error detector ==993378== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==993378== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==993378== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestRunningDeltaNotchSimulationsTutorial -malloc_debug -malloc_dump -memory_info ==993378== Parent PID: 977326 ==993378== ==993378== ==993378== FILE DESCRIPTORS: 9 open (3 std) at exit. ==993378== Open file descriptor 12: ==993378== at 0xEB6A07D: pipe (pipe.c:29) ==993378== by 0x18A1D07D: ??? ==993378== by 0x140244CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==993378== by 0x1080B418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==993378== by 0x107A4D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==993378== by 0xF49BD38: PetscInitialize (pinit.c:924) ==993378== by 0xE46B153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==993378== by 0xE46B1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==993378== by 0x122D30: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==993378== by 0x11E513: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==993378== by 0x120830: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==993378== by 0x12072B: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==993378== by 0x120D3F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==993378== by 0x11CD15: main (TestRunningDeltaNotchSimulationsTutorial.cpp:18) ==993378== ==993378== Open file descriptor 8: /dev/shm/open_mpi.0000 ==993378== at 0xEB6EA1C: __open_nocancel (open64_nocancel.c:39) ==993378== by 0xEAF2BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==993378== by 0xE49F822: ??? ==993378== by 0xE49F96F: ??? ==993378== by 0x140C96DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==993378== by 0x140C9938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==993378== by 0x1407F922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==993378== by 0x140242DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==993378== by 0x1080B418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==993378== by 0x107A4D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==993378== by 0xF49BD38: PetscInitialize (pinit.c:924) ==993378== by 0xE46B153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==993378== by 0xE46B1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==993378== by 0x122D30: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==993378== by 0x11E513: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==993378== by 0x120830: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==993378== by 0x12072B: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==993378== by 0x120D3F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==993378== by 0x11CD15: main (TestRunningDeltaNotchSimulationsTutorial.cpp:18) ==993378== ==993378== Open file descriptor 115: ==993378== ==993378== ==993378== Open file descriptor 110: ==993378== ==993378== ==993378== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestRunningDeltaNotchSimulationsTutorial_valgrind.txt ==993378== ==993378== ==993378== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==993378== ==993378== ==993378== ==993378== HEAP SUMMARY: ==993378== in use at exit: 995,524 bytes in 13,910 blocks ==993378== total heap usage: 5,190,619 allocs, 5,176,709 frees, 2,011,652,908 bytes allocated ==993378== ==993378== LEAK SUMMARY: ==993378== definitely lost: 0 bytes in 0 blocks ==993378== indirectly lost: 0 bytes in 0 blocks ==993378== possibly lost: 0 bytes in 0 blocks ==993378== still reachable: 56 bytes in 3 blocks ==993378== suppressed: 995,468 bytes in 13,907 blocks ==993378== Reachable blocks (those to which a pointer was found) are not shown. ==993378== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==993378== ==993378== For lists of detected and suppressed errors, rerun with: -s ==993378== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)