==993537== Memcheck, a memory error detector ==993537== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==993537== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==993537== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestRunningPottsBasedSimulationsTutorial -malloc_debug -malloc_dump -memory_info ==993537== Parent PID: 977326 ==993537== ==993537== ==993537== FILE DESCRIPTORS: 9 open (3 std) at exit. ==993537== Open file descriptor 12: ==993537== at 0xD2A107D: pipe (pipe.c:29) ==993537== by 0x18A1D07D: ??? ==993537== by 0x1402B4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==993537== by 0x1080B418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==993537== by 0x107A4D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==993537== by 0xF49BD38: PetscInitialize (pinit.c:924) ==993537== by 0xCBA0153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==993537== by 0xCBA01A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==993537== by 0x124714: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==993537== by 0x11FC2D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==993537== by 0x12224E: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==993537== by 0x1220EE: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==993537== by 0x122785: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==993537== by 0x11E055: main (TestRunningPottsBasedSimulationsTutorial.cpp:19) ==993537== ==993537== Open file descriptor 8: /dev/shm/open_mpi.0000 ==993537== at 0xD2A5A1C: __open_nocancel (open64_nocancel.c:39) ==993537== by 0xD229BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==993537== by 0xCBD4822: ??? ==993537== by 0xCBD496F: ??? ==993537== by 0x140D06DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==993537== by 0x140D0938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==993537== by 0x14086922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==993537== by 0x1402B2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==993537== by 0x1080B418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==993537== by 0x107A4D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==993537== by 0xF49BD38: PetscInitialize (pinit.c:924) ==993537== by 0xCBA0153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==993537== by 0xCBA01A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==993537== by 0x124714: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==993537== by 0x11FC2D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==993537== by 0x12224E: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==993537== by 0x1220EE: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==993537== by 0x122785: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==993537== by 0x11E055: main (TestRunningPottsBasedSimulationsTutorial.cpp:19) ==993537== ==993537== Open file descriptor 115: ==993537== ==993537== ==993537== Open file descriptor 110: ==993537== ==993537== ==993537== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestRunningPottsBasedSimulationsTutorial_valgrind.txt ==993537== ==993537== ==993537== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==993537== ==993537== ==993537== ==993537== HEAP SUMMARY: ==993537== in use at exit: 995,524 bytes in 13,910 blocks ==993537== total heap usage: 40,701,305 allocs, 40,687,395 frees, 4,063,946,400 bytes allocated ==993537== ==993537== LEAK SUMMARY: ==993537== definitely lost: 0 bytes in 0 blocks ==993537== indirectly lost: 0 bytes in 0 blocks ==993537== possibly lost: 0 bytes in 0 blocks ==993537== still reachable: 56 bytes in 3 blocks ==993537== suppressed: 995,468 bytes in 13,907 blocks ==993537== Reachable blocks (those to which a pointer was found) are not shown. ==993537== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==993537== ==993537== For lists of detected and suppressed errors, rerun with: -s ==993537== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)