==993538== Memcheck, a memory error detector ==993538== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==993538== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==993538== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestRunningTumourSpheroidSimulationsTutorial -malloc_debug -malloc_dump -memory_info ==993538== Parent PID: 977326 ==993538== ==993538== ==993538== FILE DESCRIPTORS: 9 open (3 std) at exit. ==993538== Open file descriptor 12: ==993538== at 0xEF0707D: pipe (pipe.c:29) ==993538== by 0x18A1D07D: ??? ==993538== by 0x140294CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==993538== by 0x1080B418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==993538== by 0x107A4D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==993538== by 0xF499D38: PetscInitialize (pinit.c:924) ==993538== by 0xE808153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==993538== by 0xE8081A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==993538== by 0x11CA56: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==993538== by 0x118313: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==993538== by 0x11A5FE: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==993538== by 0x11A4F9: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==993538== by 0x11AB0D: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==993538== by 0x116B15: main (TestRunningTumourSpheroidSimulationsTutorial.cpp:18) ==993538== ==993538== Open file descriptor 8: /dev/shm/open_mpi.0000 ==993538== at 0xEF0BA1C: __open_nocancel (open64_nocancel.c:39) ==993538== by 0xEE8FBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==993538== by 0xE83C822: ??? ==993538== by 0xE83C96F: ??? ==993538== by 0x140CE6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==993538== by 0x140CE938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==993538== by 0x14084922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==993538== by 0x140292DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==993538== by 0x1080B418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==993538== by 0x107A4D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==993538== by 0xF499D38: PetscInitialize (pinit.c:924) ==993538== by 0xE808153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==993538== by 0xE8081A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==993538== by 0x11CA56: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==993538== by 0x118313: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==993538== by 0x11A5FE: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==993538== by 0x11A4F9: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==993538== by 0x11AB0D: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==993538== by 0x116B15: main (TestRunningTumourSpheroidSimulationsTutorial.cpp:18) ==993538== ==993538== Open file descriptor 115: ==993538== ==993538== ==993538== Open file descriptor 110: ==993538== ==993538== ==993538== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestRunningTumourSpheroidSimulationsTutorial_valgrind.txt ==993538== ==993538== ==993538== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==993538== ==993538== ==993538== ==993538== HEAP SUMMARY: ==993538== in use at exit: 995,524 bytes in 13,910 blocks ==993538== total heap usage: 2,098,117 allocs, 2,084,207 frees, 1,908,204,830 bytes allocated ==993538== ==993538== LEAK SUMMARY: ==993538== definitely lost: 0 bytes in 0 blocks ==993538== indirectly lost: 0 bytes in 0 blocks ==993538== possibly lost: 0 bytes in 0 blocks ==993538== still reachable: 56 bytes in 3 blocks ==993538== suppressed: 995,468 bytes in 13,907 blocks ==993538== Reachable blocks (those to which a pointer was found) are not shown. ==993538== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==993538== ==993538== For lists of detected and suppressed errors, rerun with: -s ==993538== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)