==1958416== Memcheck, a memory error detector ==1958416== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1958416== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1958416== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestBidomainWithBathProblem -malloc_debug -malloc_dump -memory_info ==1958416== Parent PID: 1942041 ==1958416== ==1958416== ==1958416== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1958416== Open file descriptor 12: ==1958416== at 0xA8DE07D: pipe (pipe.c:29) ==1958416== by 0x13F9507D: ??? ==1958416== by 0xF7B04CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1958416== by 0xBFD9418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1958416== by 0xBF72D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1958416== by 0xAC69D38: PetscInitialize (pinit.c:924) ==1958416== by 0xA0D4153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1958416== by 0xA0D41A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1958416== by 0x14218A: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1958416== by 0x13BB8D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1958416== by 0x13F14C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1958416== by 0x13EFEC: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1958416== by 0x13F683: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1958416== by 0x139E15: main (TestBidomainWithBathProblem.cpp:19) ==1958416== ==1958416== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1958416== at 0xA8E2A1C: __open_nocancel (open64_nocancel.c:39) ==1958416== by 0xA866BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1958416== by 0xA10E822: ??? ==1958416== by 0xA10E96F: ??? ==1958416== by 0xF8556DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1958416== by 0xF855938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1958416== by 0xF80B922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1958416== by 0xF7B02DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1958416== by 0xBFD9418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1958416== by 0xBF72D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1958416== by 0xAC69D38: PetscInitialize (pinit.c:924) ==1958416== by 0xA0D4153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1958416== by 0xA0D41A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1958416== by 0x14218A: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1958416== by 0x13BB8D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1958416== by 0x13F14C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1958416== by 0x13EFEC: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1958416== by 0x13F683: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1958416== by 0x139E15: main (TestBidomainWithBathProblem.cpp:19) ==1958416== ==1958416== Open file descriptor 115: ==1958416== ==1958416== ==1958416== Open file descriptor 111: ==1958416== ==1958416== ==1958416== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestBidomainWithBathProblem_valgrind.txt ==1958416== ==1958416== ==1958416== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1958416== ==1958416== ==1958416== ==1958416== HEAP SUMMARY: ==1958416== in use at exit: 836,028 bytes in 11,682 blocks ==1958416== total heap usage: 1,405,834 allocs, 1,394,152 frees, 2,190,241,501 bytes allocated ==1958416== ==1958416== LEAK SUMMARY: ==1958416== definitely lost: 0 bytes in 0 blocks ==1958416== indirectly lost: 0 bytes in 0 blocks ==1958416== possibly lost: 0 bytes in 0 blocks ==1958416== still reachable: 24 bytes in 2 blocks ==1958416== suppressed: 836,004 bytes in 11,680 blocks ==1958416== Reachable blocks (those to which a pointer was found) are not shown. ==1958416== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1958416== ==1958416== For lists of detected and suppressed errors, rerun with: -s ==1958416== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 69 from 34)