==1943208== Memcheck, a memory error detector ==1943208== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1943208== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1943208== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCellCycleModelOdeSolver -malloc_debug -malloc_dump -memory_info ==1943208== Parent PID: 1942041 ==1943208== ==1943208== ==1943208== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1943208== Open file descriptor 12: ==1943208== at 0xE6A007D: pipe (pipe.c:29) ==1943208== by 0x18A1B07D: ??? ==1943208== by 0x12FCB4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1943208== by 0xE2ED418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1943208== by 0xE286D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1943208== by 0xCF7DD38: PetscInitialize (pinit.c:924) ==1943208== by 0xCDE5153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1943208== by 0xCDE51A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1943208== by 0x162DFB: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1943208== by 0x15D597: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1943208== by 0x1604CA: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1943208== by 0x16036A: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1943208== by 0x160A01: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1943208== by 0x15B575: main (TestCellCycleModelOdeSolver.cpp:19) ==1943208== ==1943208== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1943208== at 0xE6A4A1C: __open_nocancel (open64_nocancel.c:39) ==1943208== by 0xE628BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1943208== by 0xCE1F822: ??? ==1943208== by 0xCE1F96F: ??? ==1943208== by 0x130706DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1943208== by 0x13070938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1943208== by 0x13026922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1943208== by 0x12FCB2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1943208== by 0xE2ED418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1943208== by 0xE286D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1943208== by 0xCF7DD38: PetscInitialize (pinit.c:924) ==1943208== by 0xCDE5153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1943208== by 0xCDE51A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1943208== by 0x162DFB: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1943208== by 0x15D597: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1943208== by 0x1604CA: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1943208== by 0x16036A: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1943208== by 0x160A01: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1943208== by 0x15B575: main (TestCellCycleModelOdeSolver.cpp:19) ==1943208== ==1943208== Open file descriptor 115: ==1943208== ==1943208== ==1943208== Open file descriptor 111: ==1943208== ==1943208== ==1943208== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCellCycleModelOdeSolver_valgrind.txt ==1943208== ==1943208== ==1943208== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1943208== ==1943208== ==1943208== ==1943208== HEAP SUMMARY: ==1943208== in use at exit: 835,633 bytes in 11,677 blocks ==1943208== total heap usage: 555,243 allocs, 543,566 frees, 1,546,455,169 bytes allocated ==1943208== ==1943208== LEAK SUMMARY: ==1943208== definitely lost: 0 bytes in 0 blocks ==1943208== indirectly lost: 0 bytes in 0 blocks ==1943208== possibly lost: 0 bytes in 0 blocks ==1943208== still reachable: 56 bytes in 3 blocks ==1943208== suppressed: 835,577 bytes in 11,674 blocks ==1943208== Reachable blocks (those to which a pointer was found) are not shown. ==1943208== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1943208== ==1943208== For lists of detected and suppressed errors, rerun with: -s ==1943208== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)