==1943603== Memcheck, a memory error detector ==1943603== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1943603== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1943603== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCellKillers -malloc_debug -malloc_dump -memory_info ==1943603== Parent PID: 1942041 ==1943603== ==1943603== ==1943603== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1943603== Open file descriptor 12: ==1943603== at 0x1015207D: pipe (pipe.c:29) ==1943603== by 0x18A1C07D: ??? ==1943603== by 0x13F8D4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1943603== by 0xF973418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1943603== by 0xF90CD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1943603== by 0xE603D38: PetscInitialize (pinit.c:924) ==1943603== by 0xE46B153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1943603== by 0xE46B1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1943603== by 0x1A4341: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1943603== by 0x19C239: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1943603== by 0x19F87C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1943603== by 0x19F71C: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1943603== by 0x19FDB3: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1943603== by 0x19A655: main (TestCellKillers.cpp:19) ==1943603== ==1943603== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1943603== at 0x10156A1C: __open_nocancel (open64_nocancel.c:39) ==1943603== by 0x100DABCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1943603== by 0xE4A5822: ??? ==1943603== by 0xE4A596F: ??? ==1943603== by 0x140326DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1943603== by 0x14032938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1943603== by 0x13FE8922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1943603== by 0x13F8D2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1943603== by 0xF973418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1943603== by 0xF90CD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1943603== by 0xE603D38: PetscInitialize (pinit.c:924) ==1943603== by 0xE46B153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1943603== by 0xE46B1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1943603== by 0x1A4341: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1943603== by 0x19C239: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1943603== by 0x19F87C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1943603== by 0x19F71C: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1943603== by 0x19FDB3: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1943603== by 0x19A655: main (TestCellKillers.cpp:19) ==1943603== ==1943603== Open file descriptor 115: ==1943603== ==1943603== ==1943603== Open file descriptor 111: ==1943603== ==1943603== ==1943603== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCellKillers_valgrind.txt ==1943603== ==1943603== ==1943603== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1943603== ==1943603== ==1943603== ==1943603== HEAP SUMMARY: ==1943603== in use at exit: 835,633 bytes in 11,677 blocks ==1943603== total heap usage: 127,592 allocs, 115,915 frees, 1,545,839,775 bytes allocated ==1943603== ==1943603== LEAK SUMMARY: ==1943603== definitely lost: 0 bytes in 0 blocks ==1943603== indirectly lost: 0 bytes in 0 blocks ==1943603== possibly lost: 0 bytes in 0 blocks ==1943603== still reachable: 56 bytes in 3 blocks ==1943603== suppressed: 835,577 bytes in 11,674 blocks ==1943603== Reachable blocks (those to which a pointer was found) are not shown. ==1943603== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1943603== ==1943603== For lists of detected and suppressed errors, rerun with: -s ==1943603== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)