==2015908== Memcheck, a memory error detector ==2015908== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==2015908== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==2015908== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestPottsUpdateRules -malloc_debug -malloc_dump -memory_info ==2015908== Parent PID: 2014159 ==2015908== ==2015908== ==2015908== FILE DESCRIPTORS: 9 open (3 std) at exit. ==2015908== Open file descriptor 12: ==2015908== at 0xE7A207D: pipe (pipe.c:29) ==2015908== by 0x18A1B07D: ??? ==2015908== by 0x12F7A4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2015908== by 0xE0AA418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2015908== by 0xE043D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2015908== by 0xCD3AD38: PetscInitialize (pinit.c:924) ==2015908== by 0xCBA0153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2015908== by 0xCBA01A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2015908== by 0x133C55: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==2015908== by 0x12C93D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2015908== by 0x12F6BE: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2015908== by 0x12F55E: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2015908== by 0x12FBF5: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2015908== by 0x12AD65: main (TestPottsUpdateRules.cpp:19) ==2015908== ==2015908== Open file descriptor 8: /dev/shm/open_mpi.0000 ==2015908== at 0xE7A6A1C: __open_nocancel (open64_nocancel.c:39) ==2015908== by 0xE72ABCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==2015908== by 0xCBDA822: ??? ==2015908== by 0xCBDA96F: ??? ==2015908== by 0x1301F6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2015908== by 0x1301F938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2015908== by 0x12FD5922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2015908== by 0x12F7A2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2015908== by 0xE0AA418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2015908== by 0xE043D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2015908== by 0xCD3AD38: PetscInitialize (pinit.c:924) ==2015908== by 0xCBA0153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2015908== by 0xCBA01A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2015908== by 0x133C55: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==2015908== by 0x12C93D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2015908== by 0x12F6BE: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2015908== by 0x12F55E: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2015908== by 0x12FBF5: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2015908== by 0x12AD65: main (TestPottsUpdateRules.cpp:19) ==2015908== ==2015908== Open file descriptor 115: ==2015908== ==2015908== ==2015908== Open file descriptor 112: ==2015908== ==2015908== ==2015908== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestPottsUpdateRules_valgrind.txt ==2015908== ==2015908== ==2015908== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==2015908== ==2015908== ==2015908== ==2015908== HEAP SUMMARY: ==2015908== in use at exit: 835,633 bytes in 11,677 blocks ==2015908== total heap usage: 75,361 allocs, 63,684 frees, 1,541,673,556 bytes allocated ==2015908== ==2015908== LEAK SUMMARY: ==2015908== definitely lost: 0 bytes in 0 blocks ==2015908== indirectly lost: 0 bytes in 0 blocks ==2015908== possibly lost: 0 bytes in 0 blocks ==2015908== still reachable: 56 bytes in 3 blocks ==2015908== suppressed: 835,577 bytes in 11,674 blocks ==2015908== Reachable blocks (those to which a pointer was found) are not shown. ==2015908== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==2015908== ==2015908== For lists of detected and suppressed errors, rerun with: -s ==2015908== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)