==2029600== Memcheck, a memory error detector ==2029600== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==2029600== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==2029600== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestRunningTumourSpheroidSimulationsTutorial -malloc_debug -malloc_dump -memory_info ==2029600== Parent PID: 2014159 ==2029600== ==2029600== ==2029600== FILE DESCRIPTORS: 9 open (3 std) at exit. ==2029600== Open file descriptor 12: ==2029600== at 0xEF0F07D: pipe (pipe.c:29) ==2029600== by 0x18A1C07D: ??? ==2029600== by 0x1402D4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2029600== by 0x10813418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2029600== by 0x107ACD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2029600== by 0xF4A1D38: PetscInitialize (pinit.c:924) ==2029600== by 0xE808153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2029600== by 0xE8081A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2029600== by 0x11CA56: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==2029600== by 0x118313: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2029600== by 0x11A5FE: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2029600== by 0x11A4F9: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2029600== by 0x11AB0D: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2029600== by 0x116B15: main (TestRunningTumourSpheroidSimulationsTutorial.cpp:18) ==2029600== ==2029600== Open file descriptor 8: /dev/shm/open_mpi.0000 ==2029600== at 0xEF13A1C: __open_nocancel (open64_nocancel.c:39) ==2029600== by 0xEE97BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==2029600== by 0xE842822: ??? ==2029600== by 0xE84296F: ??? ==2029600== by 0x140D26DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2029600== by 0x140D2938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2029600== by 0x14088922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2029600== by 0x1402D2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2029600== by 0x10813418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2029600== by 0x107ACD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2029600== by 0xF4A1D38: PetscInitialize (pinit.c:924) ==2029600== by 0xE808153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2029600== by 0xE8081A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2029600== by 0x11CA56: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==2029600== by 0x118313: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2029600== by 0x11A5FE: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2029600== by 0x11A4F9: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2029600== by 0x11AB0D: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2029600== by 0x116B15: main (TestRunningTumourSpheroidSimulationsTutorial.cpp:18) ==2029600== ==2029600== Open file descriptor 115: ==2029600== ==2029600== ==2029600== Open file descriptor 112: ==2029600== ==2029600== ==2029600== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestRunningTumourSpheroidSimulationsTutorial_valgrind.txt ==2029600== ==2029600== ==2029600== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==2029600== ==2029600== ==2029600== ==2029600== HEAP SUMMARY: ==2029600== in use at exit: 835,564 bytes in 11,673 blocks ==2029600== total heap usage: 2,093,845 allocs, 2,082,172 frees, 1,876,871,044 bytes allocated ==2029600== ==2029600== LEAK SUMMARY: ==2029600== definitely lost: 0 bytes in 0 blocks ==2029600== indirectly lost: 0 bytes in 0 blocks ==2029600== possibly lost: 0 bytes in 0 blocks ==2029600== still reachable: 56 bytes in 3 blocks ==2029600== suppressed: 835,508 bytes in 11,670 blocks ==2029600== Reachable blocks (those to which a pointer was found) are not shown. ==2029600== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==2029600== ==2029600== For lists of detected and suppressed errors, rerun with: -s ==2029600== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)