==1103537== Memcheck, a memory error detector ==1103537== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1103537== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1103537== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestExtendedBidomainProblem -malloc_debug -malloc_dump -memory_info ==1103537== Parent PID: 1087048 ==1103537== ==1103537== ==1103537== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1103537== Open file descriptor 12: ==1103537== at 0xA5FC07D: pipe (pipe.c:29) ==1103537== by 0x13F9607D: ??? ==1103537== by 0xD5864CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1103537== by 0x9EEA418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1103537== by 0x9E83D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1103537== by 0xA987D38: PetscInitialize (pinit.c:924) ==1103537== by 0x9DAA153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1103537== by 0x9DAA1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1103537== by 0x124904: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1103537== by 0x11F9B3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1103537== by 0x12261C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1103537== by 0x122517: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1103537== by 0x122B2B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1103537== by 0x11E1B5: main (TestExtendedBidomainProblem.cpp:18) ==1103537== ==1103537== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1103537== at 0xA600A1C: __open_nocancel (open64_nocancel.c:39) ==1103537== by 0xA584BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1103537== by 0x9DDE822: ??? ==1103537== by 0x9DDE96F: ??? ==1103537== by 0xD62B6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1103537== by 0xD62B938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1103537== by 0xD5E1922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1103537== by 0xD5862DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1103537== by 0x9EEA418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1103537== by 0x9E83D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1103537== by 0xA987D38: PetscInitialize (pinit.c:924) ==1103537== by 0x9DAA153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1103537== by 0x9DAA1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1103537== by 0x124904: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1103537== by 0x11F9B3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1103537== by 0x12261C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1103537== by 0x122517: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1103537== by 0x122B2B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1103537== by 0x11E1B5: main (TestExtendedBidomainProblem.cpp:18) ==1103537== ==1103537== Open file descriptor 115: ==1103537== ==1103537== ==1103537== Open file descriptor 112: ==1103537== ==1103537== ==1103537== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestExtendedBidomainProblem_valgrind.txt ==1103537== ==1103537== ==1103537== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1103537== ==1103537== ==1103537== ==1103537== HEAP SUMMARY: ==1103537== in use at exit: 995,990 bytes in 13,919 blocks ==1103537== total heap usage: 2,385,793 allocs, 2,371,874 frees, 2,701,497,960 bytes allocated ==1103537== ==1103537== LEAK SUMMARY: ==1103537== definitely lost: 0 bytes in 0 blocks ==1103537== indirectly lost: 0 bytes in 0 blocks ==1103537== possibly lost: 0 bytes in 0 blocks ==1103537== still reachable: 24 bytes in 2 blocks ==1103537== suppressed: 995,966 bytes in 13,917 blocks ==1103537== Reachable blocks (those to which a pointer was found) are not shown. ==1103537== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1103537== ==1103537== For lists of detected and suppressed errors, rerun with: -s ==1103537== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 39 from 34)