==1105293== Memcheck, a memory error detector ==1105293== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1105293== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1105293== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestHdf5ToVisualizerConverters -malloc_debug -malloc_dump -memory_info ==1105293== Parent PID: 1087048 ==1105293== ==1105293== ==1105293== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1105293== Open file descriptor 12: ==1105293== at 0xA51D07D: pipe (pipe.c:29) ==1105293== by 0x13F9607D: ??? ==1105293== by 0xF79E4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1105293== by 0xBC16418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1105293== by 0xBBAFD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1105293== by 0xA8A6D38: PetscInitialize (pinit.c:924) ==1105293== by 0x9E02153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1105293== by 0x9E021A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1105293== by 0x124324: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1105293== by 0x11DB0D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1105293== by 0x120564: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1105293== by 0x120404: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1105293== by 0x120A9B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1105293== by 0x11BF35: main (TestHdf5ToVisualizerConverters.cpp:19) ==1105293== ==1105293== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1105293== at 0xA521A1C: __open_nocancel (open64_nocancel.c:39) ==1105293== by 0xA4A5BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1105293== by 0x9E36822: ??? ==1105293== by 0x9E3696F: ??? ==1105293== by 0xF8436DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1105293== by 0xF843938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1105293== by 0xF7F9922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1105293== by 0xF79E2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1105293== by 0xBC16418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1105293== by 0xBBAFD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1105293== by 0xA8A6D38: PetscInitialize (pinit.c:924) ==1105293== by 0x9E02153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1105293== by 0x9E021A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1105293== by 0x124324: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1105293== by 0x11DB0D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1105293== by 0x120564: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1105293== by 0x120404: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1105293== by 0x120A9B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1105293== by 0x11BF35: main (TestHdf5ToVisualizerConverters.cpp:19) ==1105293== ==1105293== Open file descriptor 115: ==1105293== ==1105293== ==1105293== Open file descriptor 112: ==1105293== ==1105293== ==1105293== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestHdf5ToVisualizerConverters_valgrind.txt ==1105293== ==1105293== ==1105293== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1105293== ==1105293== ==1105293== ==1105293== HEAP SUMMARY: ==1105293== in use at exit: 995,569 bytes in 13,913 blocks ==1105293== total heap usage: 135,541 allocs, 121,628 frees, 1,600,143,448 bytes allocated ==1105293== ==1105293== LEAK SUMMARY: ==1105293== definitely lost: 0 bytes in 0 blocks ==1105293== indirectly lost: 0 bytes in 0 blocks ==1105293== possibly lost: 0 bytes in 0 blocks ==1105293== still reachable: 24 bytes in 2 blocks ==1105293== suppressed: 995,545 bytes in 13,911 blocks ==1105293== Reachable blocks (those to which a pointer was found) are not shown. ==1105293== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1105293== ==1105293== For lists of detected and suppressed errors, rerun with: -s ==1105293== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)