==1102478== Memcheck, a memory error detector ==1102478== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1102478== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1102478== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestRunningMeshBasedSimulationsTutorial -malloc_debug -malloc_dump -memory_info ==1102478== Parent PID: 1087048 ==1102478== ==1102478== ==1102478== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1102478== Open file descriptor 12: ==1102478== at 0x1002107D: pipe (pipe.c:29) ==1102478== by 0x18A1D07D: ??? ==1102478== by 0x13F844CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1102478== by 0xF929418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1102478== by 0xF8C2D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1102478== by 0xE593D38: PetscInitialize (pinit.c:924) ==1102478== by 0xE46B153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1102478== by 0xE46B1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1102478== by 0x1222CD: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1102478== by 0x11D84D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1102478== by 0x11FE3C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1102478== by 0x11FCDC: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1102478== by 0x120373: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1102478== by 0x11BC75: main (TestRunningMeshBasedSimulationsTutorial.cpp:19) ==1102478== ==1102478== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1102478== at 0x10025A1C: __open_nocancel (open64_nocancel.c:39) ==1102478== by 0xFFA9BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1102478== by 0xF81D822: ??? ==1102478== by 0xF81D96F: ??? ==1102478== by 0x140296DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1102478== by 0x14029938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1102478== by 0x13FDF922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1102478== by 0x13F842DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1102478== by 0xF929418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1102478== by 0xF8C2D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1102478== by 0xE593D38: PetscInitialize (pinit.c:924) ==1102478== by 0xE46B153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1102478== by 0xE46B1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1102478== by 0x1222CD: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1102478== by 0x11D84D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1102478== by 0x11FE3C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1102478== by 0x11FCDC: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1102478== by 0x120373: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1102478== by 0x11BC75: main (TestRunningMeshBasedSimulationsTutorial.cpp:19) ==1102478== ==1102478== Open file descriptor 115: ==1102478== ==1102478== ==1102478== Open file descriptor 112: ==1102478== ==1102478== ==1102478== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestRunningMeshBasedSimulationsTutorial_valgrind.txt ==1102478== ==1102478== ==1102478== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1102478== ==1102478== ==1102478== ==1102478== HEAP SUMMARY: ==1102478== in use at exit: 995,526 bytes in 13,910 blocks ==1102478== total heap usage: 3,349,920 allocs, 3,336,010 frees, 2,500,219,146 bytes allocated ==1102478== ==1102478== LEAK SUMMARY: ==1102478== definitely lost: 0 bytes in 0 blocks ==1102478== indirectly lost: 0 bytes in 0 blocks ==1102478== possibly lost: 0 bytes in 0 blocks ==1102478== still reachable: 56 bytes in 3 blocks ==1102478== suppressed: 995,470 bytes in 13,907 blocks ==1102478== Reachable blocks (those to which a pointer was found) are not shown. ==1102478== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1102478== ==1102478== For lists of detected and suppressed errors, rerun with: -s ==1102478== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)