==2090437== Memcheck, a memory error detector ==2090437== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==2090437== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==2090437== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCellSrn -malloc_debug -malloc_dump -memory_info ==2090437== Parent PID: 2089307 ==2090437== ==2090437== ==2090437== FILE DESCRIPTORS: 9 open (3 std) at exit. ==2090437== Open file descriptor 12: ==2090437== at 0xE41907D: pipe (pipe.c:29) ==2090437== by 0x18A1E07D: ??? ==2090437== by 0x12F7A4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2090437== by 0xE068418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2090437== by 0xE001D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2090437== by 0xCCCAD38: PetscInitialize (pinit.c:924) ==2090437== by 0xCBA0153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2090437== by 0xCBA01A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2090437== by 0x119821: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==2090437== by 0x115133: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2090437== by 0x117438: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2090437== by 0x117333: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2090437== by 0x117947: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2090437== by 0x113935: main (TestCellSrn.cpp:18) ==2090437== ==2090437== Open file descriptor 8: /dev/shm/open_mpi.0000 ==2090437== at 0xE41DA1C: __open_nocancel (open64_nocancel.c:39) ==2090437== by 0xE3A1BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==2090437== by 0xDF5A822: ??? ==2090437== by 0xDF5A96F: ??? ==2090437== by 0x1301F6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2090437== by 0x1301F938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2090437== by 0x12FD5922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2090437== by 0x12F7A2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2090437== by 0xE068418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2090437== by 0xE001D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2090437== by 0xCCCAD38: PetscInitialize (pinit.c:924) ==2090437== by 0xCBA0153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2090437== by 0xCBA01A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2090437== by 0x119821: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==2090437== by 0x115133: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2090437== by 0x117438: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2090437== by 0x117333: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2090437== by 0x117947: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2090437== by 0x113935: main (TestCellSrn.cpp:18) ==2090437== ==2090437== Open file descriptor 115: ==2090437== ==2090437== ==2090437== Open file descriptor 112: ==2090437== ==2090437== ==2090437== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCellSrn_valgrind.txt ==2090437== ==2090437== ==2090437== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==2090437== ==2090437== ==2090437== ==2090437== HEAP SUMMARY: ==2090437== in use at exit: 835,697 bytes in 11,678 blocks ==2090437== total heap usage: 71,192 allocs, 59,514 frees, 1,541,084,840 bytes allocated ==2090437== ==2090437== LEAK SUMMARY: ==2090437== definitely lost: 0 bytes in 0 blocks ==2090437== indirectly lost: 0 bytes in 0 blocks ==2090437== possibly lost: 0 bytes in 0 blocks ==2090437== still reachable: 120 bytes in 4 blocks ==2090437== suppressed: 835,577 bytes in 11,674 blocks ==2090437== Reachable blocks (those to which a pointer was found) are not shown. ==2090437== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==2090437== ==2090437== For lists of detected and suppressed errors, rerun with: -s ==2090437== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)