==2089557== Memcheck, a memory error detector ==2089557== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==2089557== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==2089557== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/io/test/TestParallelColumnDataReaderWriter -malloc_debug -malloc_dump -memory_info ==2089557== Parent PID: 2089307 ==2089557== ==2089557== ==2089557== FILE DESCRIPTORS: 9 open (3 std) at exit. ==2089557== Open file descriptor 12: ==2089557== at 0x60AF07D: pipe (pipe.c:29) ==2089557== by 0xAF1707D: ??? ==2089557== by 0x8F464CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2089557== by 0x665F418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2089557== by 0x65F8D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2089557== by 0x4A95D38: PetscInitialize (pinit.c:924) ==2089557== by 0x496D153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2089557== by 0x496D1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2089557== by 0x11B354: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==2089557== by 0x114A4D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2089557== by 0x1174D8: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2089557== by 0x117378: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2089557== by 0x117A0F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2089557== by 0x112E75: main (TestParallelColumnDataReaderWriter.cpp:19) ==2089557== ==2089557== Open file descriptor 8: /dev/shm/open_mpi.0000 ==2089557== at 0x60B3A1C: __open_nocancel (open64_nocancel.c:39) ==2089557== by 0x6037BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==2089557== by 0x5D25822: ??? ==2089557== by 0x5D2596F: ??? ==2089557== by 0x8FEB6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2089557== by 0x8FEB938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2089557== by 0x8FA1922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2089557== by 0x8F462DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2089557== by 0x665F418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2089557== by 0x65F8D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2089557== by 0x4A95D38: PetscInitialize (pinit.c:924) ==2089557== by 0x496D153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2089557== by 0x496D1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2089557== by 0x11B354: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==2089557== by 0x114A4D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2089557== by 0x1174D8: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2089557== by 0x117378: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2089557== by 0x117A0F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2089557== by 0x112E75: main (TestParallelColumnDataReaderWriter.cpp:19) ==2089557== ==2089557== Open file descriptor 115: ==2089557== ==2089557== ==2089557== Open file descriptor 112: ==2089557== ==2089557== ==2089557== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestParallelColumnDataReaderWriter_valgrind.txt ==2089557== ==2089557== ==2089557== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==2089557== ==2089557== ==2089557== ==2089557== HEAP SUMMARY: ==2089557== in use at exit: 835,153 bytes in 11,676 blocks ==2089557== total heap usage: 54,510 allocs, 42,834 frees, 1,540,534,259 bytes allocated ==2089557== ==2089557== LEAK SUMMARY: ==2089557== definitely lost: 0 bytes in 0 blocks ==2089557== indirectly lost: 0 bytes in 0 blocks ==2089557== possibly lost: 0 bytes in 0 blocks ==2089557== still reachable: 24 bytes in 2 blocks ==2089557== suppressed: 835,129 bytes in 11,674 blocks ==2089557== Reachable blocks (those to which a pointer was found) are not shown. ==2089557== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==2089557== ==2089557== For lists of detected and suppressed errors, rerun with: -s ==2089557== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)