==2131549== Memcheck, a memory error detector ==2131549== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==2131549== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==2131549== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOffLatticeSimulationWithNodeBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==2131549== Parent PID: 2129587 ==2131549== ==2131549== ==2131549== FILE DESCRIPTORS: 9 open (3 std) at exit. ==2131549== Open file descriptor 12: ==2131549== at 0xEC9D07D: pipe (pipe.c:29) ==2131549== by 0x18A1C07D: ??? ==2131549== by 0x1402D4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2131549== by 0x108FA418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2131549== by 0x10893D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2131549== by 0xF58AD38: PetscInitialize (pinit.c:924) ==2131549== by 0xE46B153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2131549== by 0xE46B1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2131549== by 0x213670: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==2131549== by 0x20AE19: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2131549== by 0x20EA68: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2131549== by 0x20E908: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2131549== by 0x20EF9F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2131549== by 0x209235: main (TestOffLatticeSimulationWithNodeBasedCellPopulation.cpp:19) ==2131549== ==2131549== Open file descriptor 8: /dev/shm/open_mpi.0000 ==2131549== at 0xECA1A1C: __open_nocancel (open64_nocancel.c:39) ==2131549== by 0xEC25BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==2131549== by 0xE4A5822: ??? ==2131549== by 0xE4A596F: ??? ==2131549== by 0x140D26DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2131549== by 0x140D2938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2131549== by 0x14088922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2131549== by 0x1402D2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2131549== by 0x108FA418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2131549== by 0x10893D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2131549== by 0xF58AD38: PetscInitialize (pinit.c:924) ==2131549== by 0xE46B153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2131549== by 0xE46B1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2131549== by 0x213670: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==2131549== by 0x20AE19: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2131549== by 0x20EA68: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2131549== by 0x20E908: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2131549== by 0x20EF9F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2131549== by 0x209235: main (TestOffLatticeSimulationWithNodeBasedCellPopulation.cpp:19) ==2131549== ==2131549== Open file descriptor 115: ==2131549== ==2131549== ==2131549== Open file descriptor 112: ==2131549== ==2131549== ==2131549== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOffLatticeSimulationWithNodeBasedCellPopulation_valgrind.txt ==2131549== ==2131549== ==2131549== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==2131549== ==2131549== ==2131549== ==2131549== HEAP SUMMARY: ==2131549== in use at exit: 835,596 bytes in 11,674 blocks ==2131549== total heap usage: 17,964,735 allocs, 17,953,061 frees, 30,277,330,392 bytes allocated ==2131549== ==2131549== LEAK SUMMARY: ==2131549== definitely lost: 0 bytes in 0 blocks ==2131549== indirectly lost: 0 bytes in 0 blocks ==2131549== possibly lost: 0 bytes in 0 blocks ==2131549== still reachable: 88 bytes in 4 blocks ==2131549== suppressed: 835,508 bytes in 11,670 blocks ==2131549== Reachable blocks (those to which a pointer was found) are not shown. ==2131549== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==2131549== ==2131549== For lists of detected and suppressed errors, rerun with: -s ==2131549== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)