==2166887== Memcheck, a memory error detector ==2166887== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==2166887== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==2166887== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestNumericalMethods -malloc_debug -malloc_dump -memory_info ==2166887== Parent PID: 2165091 ==2166887== ==2166887== ==2166887== FILE DESCRIPTORS: 10 open (3 std) at exit. ==2166887== Open file descriptor 12: ==2166887== at 0xEC5907D: pipe (pipe.c:29) ==2166887== by 0x18A1C07D: ??? ==2166887== by 0x1402D4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2166887== by 0x108FA418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2166887== by 0x10893D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2166887== by 0xF58AD38: PetscInitialize (pinit.c:924) ==2166887== by 0xE46B153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2166887== by 0xE46B1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2166887== by 0x13A648: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==2166887== by 0x13504D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2166887== by 0x137DD4: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2166887== by 0x137C74: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2166887== by 0x13830B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2166887== by 0x133475: main (TestNumericalMethods.cpp:19) ==2166887== ==2166887== Open file descriptor 8: /dev/shm/open_mpi.0000 ==2166887== at 0xEC5DA1C: __open_nocancel (open64_nocancel.c:39) ==2166887== by 0xEBE1BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==2166887== by 0xE4A5822: ??? ==2166887== by 0xE4A596F: ??? ==2166887== by 0x140D26DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2166887== by 0x140D2938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2166887== by 0x14088922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2166887== by 0x1402D2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2166887== by 0x108FA418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2166887== by 0x10893D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2166887== by 0xF58AD38: PetscInitialize (pinit.c:924) ==2166887== by 0xE46B153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2166887== by 0xE46B1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2166887== by 0x13A648: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==2166887== by 0x13504D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2166887== by 0x137DD4: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2166887== by 0x137C74: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2166887== by 0x13830B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2166887== by 0x133475: main (TestNumericalMethods.cpp:19) ==2166887== ==2166887== Open file descriptor 118: ==2166887== ==2166887== ==2166887== Open file descriptor 114: ==2166887== ==2166887== ==2166887== Open file descriptor 113: /usr/share/ca-certificates/mozilla/QuoVadis_Root_CA_2_G3.crt ==2166887== ==2166887== ==2166887== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestNumericalMethods_valgrind.txt ==2166887== ==2166887== ==2166887== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==2166887== ==2166887== ==2166887== ==2166887== HEAP SUMMARY: ==2166887== in use at exit: 835,633 bytes in 11,677 blocks ==2166887== total heap usage: 77,029 allocs, 65,352 frees, 1,543,555,055 bytes allocated ==2166887== ==2166887== LEAK SUMMARY: ==2166887== definitely lost: 0 bytes in 0 blocks ==2166887== indirectly lost: 0 bytes in 0 blocks ==2166887== possibly lost: 0 bytes in 0 blocks ==2166887== still reachable: 56 bytes in 3 blocks ==2166887== suppressed: 835,577 bytes in 11,674 blocks ==2166887== Reachable blocks (those to which a pointer was found) are not shown. ==2166887== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==2166887== ==2166887== For lists of detected and suppressed errors, rerun with: -s ==2166887== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)