==2167069== Memcheck, a memory error detector ==2167069== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==2167069== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==2167069== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOffLatticeSimulationWithPdes -malloc_debug -malloc_dump -memory_info ==2167069== Parent PID: 2165091 ==2167069== ==2167069== ==2167069== FILE DESCRIPTORS: 10 open (3 std) at exit. ==2167069== Open file descriptor 12: ==2167069== at 0xF03A07D: pipe (pipe.c:29) ==2167069== by 0x18A1C07D: ??? ==2167069== by 0x1402D4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2167069== by 0x108FA418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2167069== by 0x10893D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2167069== by 0xF58AD38: PetscInitialize (pinit.c:924) ==2167069== by 0xE808153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2167069== by 0xE8081A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2167069== by 0x226536: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==2167069== by 0x21FB71: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2167069== by 0x2236DC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2167069== by 0x22357C: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2167069== by 0x223C13: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2167069== by 0x21DF55: main (TestOffLatticeSimulationWithPdes.cpp:19) ==2167069== ==2167069== Open file descriptor 8: /dev/shm/open_mpi.0000 ==2167069== at 0xF03EA1C: __open_nocancel (open64_nocancel.c:39) ==2167069== by 0xEFC2BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==2167069== by 0xE842822: ??? ==2167069== by 0xE84296F: ??? ==2167069== by 0x140D26DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2167069== by 0x140D2938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2167069== by 0x14088922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2167069== by 0x1402D2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2167069== by 0x108FA418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2167069== by 0x10893D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2167069== by 0xF58AD38: PetscInitialize (pinit.c:924) ==2167069== by 0xE808153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2167069== by 0xE8081A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2167069== by 0x226536: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==2167069== by 0x21FB71: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2167069== by 0x2236DC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2167069== by 0x22357C: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2167069== by 0x223C13: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2167069== by 0x21DF55: main (TestOffLatticeSimulationWithPdes.cpp:19) ==2167069== ==2167069== Open file descriptor 118: ==2167069== ==2167069== ==2167069== Open file descriptor 114: ==2167069== ==2167069== ==2167069== Open file descriptor 113: /usr/share/ca-certificates/mozilla/QuoVadis_Root_CA_2_G3.crt ==2167069== ==2167069== ==2167069== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOffLatticeSimulationWithPdes_valgrind.txt ==2167069== ==2167069== ==2167069== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==2167069== ==2167069== ==2167069== ==2167069== HEAP SUMMARY: ==2167069== in use at exit: 835,564 bytes in 11,673 blocks ==2167069== total heap usage: 7,503,803 allocs, 7,492,130 frees, 2,846,060,754 bytes allocated ==2167069== ==2167069== LEAK SUMMARY: ==2167069== definitely lost: 0 bytes in 0 blocks ==2167069== indirectly lost: 0 bytes in 0 blocks ==2167069== possibly lost: 0 bytes in 0 blocks ==2167069== still reachable: 56 bytes in 3 blocks ==2167069== suppressed: 835,508 bytes in 11,670 blocks ==2167069== Reachable blocks (those to which a pointer was found) are not shown. ==2167069== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==2167069== ==2167069== For lists of detected and suppressed errors, rerun with: -s ==2167069== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)