==2262390== Memcheck, a memory error detector ==2262390== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==2262390== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==2262390== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOffLatticeSimulation3d -malloc_debug -malloc_dump -memory_info ==2262390== Parent PID: 2260543 ==2262390== ==2262390== ==2262390== FILE DESCRIPTORS: 9 open (3 std) at exit. ==2262390== Open file descriptor 12: ==2262390== at 0x1015207D: pipe (pipe.c:29) ==2262390== by 0x18A1C07D: ??? ==2262390== by 0x13F8D4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2262390== by 0xF973418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2262390== by 0xF90CD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2262390== by 0xE603D38: PetscInitialize (pinit.c:924) ==2262390== by 0xE46B153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2262390== by 0xE46B1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2262390== by 0x1FF4E9: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==2262390== by 0x1F945F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2262390== by 0x1FC774: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2262390== by 0x1FC670: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2262390== by 0x1FCC83: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2262390== by 0x1F7C55: main (TestOffLatticeSimulation3d.cpp:18) ==2262390== ==2262390== Open file descriptor 8: /dev/shm/open_mpi.0000 ==2262390== at 0x10156A1C: __open_nocancel (open64_nocancel.c:39) ==2262390== by 0x100DABCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==2262390== by 0xE4A5822: ??? ==2262390== by 0xE4A596F: ??? ==2262390== by 0x140326DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2262390== by 0x14032938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2262390== by 0x13FE8922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2262390== by 0x13F8D2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2262390== by 0xF973418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2262390== by 0xF90CD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2262390== by 0xE603D38: PetscInitialize (pinit.c:924) ==2262390== by 0xE46B153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2262390== by 0xE46B1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2262390== by 0x1FF4E9: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==2262390== by 0x1F945F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2262390== by 0x1FC774: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2262390== by 0x1FC670: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2262390== by 0x1FCC83: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2262390== by 0x1F7C55: main (TestOffLatticeSimulation3d.cpp:18) ==2262390== ==2262390== Open file descriptor 115: ==2262390== ==2262390== ==2262390== Open file descriptor 112: ==2262390== ==2262390== ==2262390== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOffLatticeSimulation3d_valgrind.txt ==2262390== ==2262390== ==2262390== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==2262390== ==2262390== ==2262390== ==2262390== HEAP SUMMARY: ==2262390== in use at exit: 835,633 bytes in 11,677 blocks ==2262390== total heap usage: 862,671 allocs, 850,994 frees, 1,705,758,872 bytes allocated ==2262390== ==2262390== LEAK SUMMARY: ==2262390== definitely lost: 0 bytes in 0 blocks ==2262390== indirectly lost: 0 bytes in 0 blocks ==2262390== possibly lost: 0 bytes in 0 blocks ==2262390== still reachable: 56 bytes in 3 blocks ==2262390== suppressed: 835,577 bytes in 11,674 blocks ==2262390== Reachable blocks (those to which a pointer was found) are not shown. ==2262390== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==2262390== ==2262390== For lists of detected and suppressed errors, rerun with: -s ==2262390== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)