==2312459== Memcheck, a memory error detector ==2312459== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==2312459== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==2312459== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCaBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==2312459== Parent PID: 2310862 ==2312459== ==2312459== ==2312459== FILE DESCRIPTORS: 9 open (3 std) at exit. ==2312459== Open file descriptor 12: ==2312459== at 0xF84407D: pipe (pipe.c:29) ==2312459== by 0x196AB07D: ??? ==2312459== by 0x14CBC4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2312459== by 0x114A3418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2312459== by 0x1143CD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2312459== by 0x10131D38: PetscInitialize (pinit.c:924) ==2312459== by 0xF0FA2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2312459== by 0xF0FA32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2312459== by 0x16556C: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==2312459== by 0x15DBC9: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2312459== by 0x160D98: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2312459== by 0x160C38: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2312459== by 0x1612CF: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2312459== by 0x15BFE5: main (TestCaBasedCellPopulation.cpp:19) ==2312459== ==2312459== Open file descriptor 8: /dev/shm/open_mpi.0000 ==2312459== at 0xF848A1C: __open_nocancel (open64_nocancel.c:39) ==2312459== by 0xF7CCBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==2312459== by 0xF135822: ??? ==2312459== by 0xF13596F: ??? ==2312459== by 0x14D616DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2312459== by 0x14D61938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2312459== by 0x14D17922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2312459== by 0x14CBC2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2312459== by 0x114A3418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2312459== by 0x1143CD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2312459== by 0x10131D38: PetscInitialize (pinit.c:924) ==2312459== by 0xF0FA2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2312459== by 0xF0FA32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2312459== by 0x16556C: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==2312459== by 0x15DBC9: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2312459== by 0x160D98: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2312459== by 0x160C38: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2312459== by 0x1612CF: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2312459== by 0x15BFE5: main (TestCaBasedCellPopulation.cpp:19) ==2312459== ==2312459== Open file descriptor 115: ==2312459== ==2312459== ==2312459== Open file descriptor 112: ==2312459== ==2312459== ==2312459== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCaBasedCellPopulation_valgrind.txt ==2312459== ==2312459== ==2312459== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==2312459== ==2312459== ==2312459== ==2312459== HEAP SUMMARY: ==2312459== in use at exit: 835,633 bytes in 11,677 blocks ==2312459== total heap usage: 84,235 allocs, 72,558 frees, 1,549,119,058 bytes allocated ==2312459== ==2312459== LEAK SUMMARY: ==2312459== definitely lost: 0 bytes in 0 blocks ==2312459== indirectly lost: 0 bytes in 0 blocks ==2312459== possibly lost: 0 bytes in 0 blocks ==2312459== still reachable: 56 bytes in 3 blocks ==2312459== suppressed: 835,577 bytes in 11,674 blocks ==2312459== Reachable blocks (those to which a pointer was found) are not shown. ==2312459== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==2312459== ==2312459== For lists of detected and suppressed errors, rerun with: -s ==2312459== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)