==1902832== Memcheck, a memory error detector ==1902832== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1902832== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1902832== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCaUpdateRules -malloc_debug -malloc_dump -memory_info ==1902832== Parent PID: 1901347 ==1902832== ==1902832== ==1902832== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1902832== Open file descriptor 12: ==1902832== at 0xCF9726D: pipe (pipe.c:29) ==1902832== by 0x18AE007D: ??? ==1902832== by 0x1407D4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1902832== by 0x104BD418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1902832== by 0x10456D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1902832== by 0xF14BD38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==1902832== by 0xCB9C153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1902832== by 0xCB9C1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1902832== by 0x132AA2: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1902832== by 0x12BE03: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1902832== by 0x12E8F4: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1902832== by 0x12E7EF: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1902832== by 0x12EE03: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1902832== by 0x12A605: main (TestCaUpdateRules.cpp:18) ==1902832== ==1902832== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1902832== at 0xCF9BC0C: __open_nocancel (open64_nocancel.c:39) ==1902832== by 0xCF1FBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1902832== by 0xCBD0822: ??? ==1902832== by 0xCBD096F: ??? ==1902832== by 0x141226DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1902832== by 0x14122938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1902832== by 0x140D8922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1902832== by 0x1407D2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1902832== by 0x104BD418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1902832== by 0x10456D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1902832== by 0xF14BD38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==1902832== by 0xCB9C153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1902832== by 0xCB9C1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1902832== by 0x132AA2: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1902832== by 0x12BE03: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1902832== by 0x12E8F4: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1902832== by 0x12E7EF: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1902832== by 0x12EE03: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1902832== by 0x12A605: main (TestCaUpdateRules.cpp:18) ==1902832== ==1902832== Open file descriptor 115: ==1902832== ==1902832== ==1902832== Open file descriptor 112: ==1902832== ==1902832== ==1902832== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCaUpdateRules_valgrind.txt ==1902832== ==1902832== ==1902832== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1902832== ==1902832== ==1902832== ==1902832== HEAP SUMMARY: ==1902832== in use at exit: 858,024 bytes in 12,113 blocks ==1902832== total heap usage: 63,846 allocs, 51,733 frees, 1,543,604,433 bytes allocated ==1902832== ==1902832== LEAK SUMMARY: ==1902832== definitely lost: 0 bytes in 0 blocks ==1902832== indirectly lost: 0 bytes in 0 blocks ==1902832== possibly lost: 0 bytes in 0 blocks ==1902832== still reachable: 56 bytes in 3 blocks ==1902832== suppressed: 857,968 bytes in 12,110 blocks ==1902832== Reachable blocks (those to which a pointer was found) are not shown. ==1902832== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1902832== ==1902832== For lists of detected and suppressed errors, rerun with: -s ==1902832== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 23 from 23)