==1910721== Memcheck, a memory error detector ==1910721== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1910721== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1910721== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestExtendedBidomainProblem -malloc_debug -malloc_dump -memory_info ==1910721== Parent PID: 1901347 ==1910721== ==1910721== ==1910721== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1910721== Open file descriptor 12: ==1910721== at 0xA2B326D: pipe (pipe.c:29) ==1910721== by 0x1405B07D: ??? ==1910721== by 0xD62E4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1910721== by 0x9EE6418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1910721== by 0x9E7FD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1910721== by 0xA63BD38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==1910721== by 0x9DA9153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1910721== by 0x9DA91A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1910721== by 0x124860: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1910721== by 0x11F973: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1910721== by 0x122578: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1910721== by 0x122473: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1910721== by 0x122A87: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1910721== by 0x11E175: main (TestExtendedBidomainProblem.cpp:18) ==1910721== ==1910721== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1910721== at 0xA2B7C0C: __open_nocancel (open64_nocancel.c:39) ==1910721== by 0xA23BBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1910721== by 0x9DDD822: ??? ==1910721== by 0x9DDD96F: ??? ==1910721== by 0xD6D36DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1910721== by 0xD6D3938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1910721== by 0xD689922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1910721== by 0xD62E2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1910721== by 0x9EE6418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1910721== by 0x9E7FD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1910721== by 0xA63BD38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==1910721== by 0x9DA9153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1910721== by 0x9DA91A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1910721== by 0x124860: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1910721== by 0x11F973: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1910721== by 0x122578: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1910721== by 0x122473: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1910721== by 0x122A87: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1910721== by 0x11E175: main (TestExtendedBidomainProblem.cpp:18) ==1910721== ==1910721== Open file descriptor 115: ==1910721== ==1910721== ==1910721== Open file descriptor 112: ==1910721== ==1910721== ==1910721== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestExtendedBidomainProblem_valgrind.txt ==1910721== ==1910721== ==1910721== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1910721== ==1910721== ==1910721== ==1910721== HEAP SUMMARY: ==1910721== in use at exit: 858,425 bytes in 12,118 blocks ==1910721== total heap usage: 2,381,782 allocs, 2,369,664 frees, 2,672,892,761 bytes allocated ==1910721== ==1910721== LEAK SUMMARY: ==1910721== definitely lost: 0 bytes in 0 blocks ==1910721== indirectly lost: 0 bytes in 0 blocks ==1910721== possibly lost: 0 bytes in 0 blocks ==1910721== still reachable: 24 bytes in 2 blocks ==1910721== suppressed: 858,401 bytes in 12,116 blocks ==1910721== Reachable blocks (those to which a pointer was found) are not shown. ==1910721== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1910721== ==1910721== For lists of detected and suppressed errors, rerun with: -s ==1910721== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 25 from 20)