==1902934== Memcheck, a memory error detector ==1902934== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1902934== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1902934== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestMeshBasedCellPopulationWithGhostNodes -malloc_debug -malloc_dump -memory_info ==1902934== Parent PID: 1901347 ==1902934== ==1902934== ==1902934== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1902934== Open file descriptor 12: ==1902934== at 0xFDBC26D: pipe (pipe.c:29) ==1902934== by 0x18ADF07D: ??? ==1902934== by 0x140294CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1902934== by 0xF922418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1902934== by 0xF8BBD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1902934== by 0xE58FD38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==1902934== by 0xE467153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1902934== by 0xE4671A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1902934== by 0x159C05: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1902934== by 0x15216D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1902934== by 0x1555B6: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1902934== by 0x155456: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1902934== by 0x155AED: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1902934== by 0x150595: main (TestMeshBasedCellPopulationWithGhostNodes.cpp:19) ==1902934== ==1902934== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1902934== at 0xFDC0C0C: __open_nocancel (open64_nocancel.c:39) ==1902934== by 0xFD44BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1902934== by 0xF819822: ??? ==1902934== by 0xF81996F: ??? ==1902934== by 0x140D06DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1902934== by 0x140D0938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1902934== by 0x14086922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1902934== by 0x140292DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1902934== by 0xF922418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1902934== by 0xF8BBD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1902934== by 0xE58FD38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==1902934== by 0xE467153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1902934== by 0xE4671A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1902934== by 0x159C05: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1902934== by 0x15216D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1902934== by 0x1555B6: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1902934== by 0x155456: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1902934== by 0x155AED: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1902934== by 0x150595: main (TestMeshBasedCellPopulationWithGhostNodes.cpp:19) ==1902934== ==1902934== Open file descriptor 115: ==1902934== ==1902934== ==1902934== Open file descriptor 112: ==1902934== ==1902934== ==1902934== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestMeshBasedCellPopulationWithGhostNodes_valgrind.txt ==1902934== ==1902934== ==1902934== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1902934== ==1902934== ==1902934== ==1902934== HEAP SUMMARY: ==1902934== in use at exit: 858,024 bytes in 12,113 blocks ==1902934== total heap usage: 227,906 allocs, 215,793 frees, 1,567,954,636 bytes allocated ==1902934== ==1902934== LEAK SUMMARY: ==1902934== definitely lost: 0 bytes in 0 blocks ==1902934== indirectly lost: 0 bytes in 0 blocks ==1902934== possibly lost: 0 bytes in 0 blocks ==1902934== still reachable: 56 bytes in 3 blocks ==1902934== suppressed: 857,968 bytes in 12,110 blocks ==1902934== Reachable blocks (those to which a pointer was found) are not shown. ==1902934== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1902934== ==1902934== For lists of detected and suppressed errors, rerun with: -s ==1902934== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 23 from 23)