==2364607== Memcheck, a memory error detector ==2364607== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==2364607== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==2364607== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestBidomainWithSvi -malloc_debug -malloc_dump -memory_info ==2364607== Parent PID: 2348067 ==2364607== ==2364607== ==2364607== FILE DESCRIPTORS: 9 open (3 std) at exit. ==2364607== Open file descriptor 12: ==2364607== at 0xA7ED07D: pipe (pipe.c:29) ==2364607== by 0x1432807D: ??? ==2364607== by 0xFB3A4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2364607== by 0xBEE6418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2364607== by 0xBE7FD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2364607== by 0xAB76D38: PetscInitialize (pinit.c:924) ==2364607== by 0xA0C92DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2364607== by 0xA0C932D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2364607== by 0x120EA2: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==2364607== by 0x11C673: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2364607== by 0x11EA90: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2364607== by 0x11E98B: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2364607== by 0x11EF9F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2364607== by 0x11AE75: main (TestBidomainWithSvi.cpp:18) ==2364607== ==2364607== Open file descriptor 8: /dev/shm/open_mpi.0000 ==2364607== at 0xA7F1A1C: __open_nocancel (open64_nocancel.c:39) ==2364607== by 0xA775BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==2364607== by 0xA104822: ??? ==2364607== by 0xA10496F: ??? ==2364607== by 0xFBDF6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2364607== by 0xFBDF938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2364607== by 0xFB95922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2364607== by 0xFB3A2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2364607== by 0xBEE6418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2364607== by 0xBE7FD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2364607== by 0xAB76D38: PetscInitialize (pinit.c:924) ==2364607== by 0xA0C92DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2364607== by 0xA0C932D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2364607== by 0x120EA2: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==2364607== by 0x11C673: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2364607== by 0x11EA90: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2364607== by 0x11E98B: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2364607== by 0x11EF9F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2364607== by 0x11AE75: main (TestBidomainWithSvi.cpp:18) ==2364607== ==2364607== Open file descriptor 115: ==2364607== ==2364607== ==2364607== Open file descriptor 112: ==2364607== ==2364607== ==2364607== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestBidomainWithSvi_valgrind.txt ==2364607== ==2364607== ==2364607== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==2364607== ==2364607== ==2364607== ==2364607== HEAP SUMMARY: ==2364607== in use at exit: 836,028 bytes in 11,682 blocks ==2364607== total heap usage: 3,548,603 allocs, 3,536,921 frees, 2,248,395,268 bytes allocated ==2364607== ==2364607== LEAK SUMMARY: ==2364607== definitely lost: 0 bytes in 0 blocks ==2364607== indirectly lost: 0 bytes in 0 blocks ==2364607== possibly lost: 0 bytes in 0 blocks ==2364607== still reachable: 24 bytes in 2 blocks ==2364607== suppressed: 836,004 bytes in 11,680 blocks ==2364607== Reachable blocks (those to which a pointer was found) are not shown. ==2364607== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==2364607== ==2364607== For lists of detected and suppressed errors, rerun with: -s ==2364607== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 69 from 31)