==2349359== Memcheck, a memory error detector ==2349359== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==2349359== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==2349359== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCellsGenerator -malloc_debug -malloc_dump -memory_info ==2349359== Parent PID: 2348067 ==2349359== ==2349359== ==2349359== FILE DESCRIPTORS: 9 open (3 std) at exit. ==2349359== Open file descriptor 12: ==2349359== at 0xF80207D: pipe (pipe.c:29) ==2349359== by 0x196AB07D: ??? ==2349359== by 0x14CBC4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2349359== by 0x114A3418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2349359== by 0x1143CD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2349359== by 0x10133D38: PetscInitialize (pinit.c:924) ==2349359== by 0xF0FA2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2349359== by 0xF0FA32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2349359== by 0x1248EE: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==2349359== by 0x11F90D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2349359== by 0x122428: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2349359== by 0x1222C8: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2349359== by 0x12295F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2349359== by 0x11DD35: main (TestCellsGenerator.cpp:19) ==2349359== ==2349359== Open file descriptor 8: /dev/shm/open_mpi.0000 ==2349359== at 0xF806A1C: __open_nocancel (open64_nocancel.c:39) ==2349359== by 0xF78ABCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==2349359== by 0xF135822: ??? ==2349359== by 0xF13596F: ??? ==2349359== by 0x14D616DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2349359== by 0x14D61938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2349359== by 0x14D17922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2349359== by 0x14CBC2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2349359== by 0x114A3418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2349359== by 0x1143CD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2349359== by 0x10133D38: PetscInitialize (pinit.c:924) ==2349359== by 0xF0FA2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2349359== by 0xF0FA32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2349359== by 0x1248EE: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==2349359== by 0x11F90D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2349359== by 0x122428: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2349359== by 0x1222C8: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2349359== by 0x12295F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2349359== by 0x11DD35: main (TestCellsGenerator.cpp:19) ==2349359== ==2349359== Open file descriptor 115: ==2349359== ==2349359== ==2349359== Open file descriptor 112: ==2349359== ==2349359== ==2349359== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCellsGenerator_valgrind.txt ==2349359== ==2349359== ==2349359== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==2349359== ==2349359== ==2349359== ==2349359== HEAP SUMMARY: ==2349359== in use at exit: 835,697 bytes in 11,678 blocks ==2349359== total heap usage: 77,807 allocs, 66,129 frees, 1,542,451,675 bytes allocated ==2349359== ==2349359== LEAK SUMMARY: ==2349359== definitely lost: 0 bytes in 0 blocks ==2349359== indirectly lost: 0 bytes in 0 blocks ==2349359== possibly lost: 0 bytes in 0 blocks ==2349359== still reachable: 120 bytes in 4 blocks ==2349359== suppressed: 835,577 bytes in 11,674 blocks ==2349359== Reachable blocks (those to which a pointer was found) are not shown. ==2349359== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==2349359== ==2349359== For lists of detected and suppressed errors, rerun with: -s ==2349359== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)