==2363417== Memcheck, a memory error detector ==2363417== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==2363417== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==2363417== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCreatingAndUsingANewSrnModelTutorial -malloc_debug -malloc_dump -memory_info ==2363417== Parent PID: 2348067 ==2363417== ==2363417== ==2363417== FILE DESCRIPTORS: 9 open (3 std) at exit. ==2363417== Open file descriptor 12: ==2363417== at 0x1102507D: pipe (pipe.c:29) ==2363417== by 0x196AC07D: ??? ==2363417== by 0x14C6E4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2363417== by 0x10846418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2363417== by 0x107DFD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2363417== by 0xF4D6D38: PetscInitialize (pinit.c:924) ==2363417== by 0xF33D2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2363417== by 0xF33D32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2363417== by 0x261089: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==2363417== by 0x25978B: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2363417== by 0x25E30E: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2363417== by 0x25E1AF: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2363417== by 0x25E845: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2363417== by 0x255DF5: main (TestCreatingAndUsingANewSrnModelTutorial.cpp:19) ==2363417== ==2363417== Open file descriptor 8: /dev/shm/open_mpi.0000 ==2363417== at 0x11029A1C: __open_nocancel (open64_nocancel.c:39) ==2363417== by 0x10FADBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==2363417== by 0xF378822: ??? ==2363417== by 0xF37896F: ??? ==2363417== by 0x14D156DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2363417== by 0x14D15938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2363417== by 0x14CCB922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2363417== by 0x14C6E2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2363417== by 0x10846418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2363417== by 0x107DFD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2363417== by 0xF4D6D38: PetscInitialize (pinit.c:924) ==2363417== by 0xF33D2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2363417== by 0xF33D32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2363417== by 0x261089: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==2363417== by 0x25978B: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2363417== by 0x25E30E: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2363417== by 0x25E1AF: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2363417== by 0x25E845: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2363417== by 0x255DF5: main (TestCreatingAndUsingANewSrnModelTutorial.cpp:19) ==2363417== ==2363417== Open file descriptor 115: ==2363417== ==2363417== ==2363417== Open file descriptor 112: ==2363417== ==2363417== ==2363417== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCreatingAndUsingANewSrnModelTutorial_valgrind.txt ==2363417== ==2363417== ==2363417== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==2363417== ==2363417== ==2363417== ==2363417== HEAP SUMMARY: ==2363417== in use at exit: 835,564 bytes in 11,673 blocks ==2363417== total heap usage: 3,827,192 allocs, 3,815,519 frees, 1,711,613,989 bytes allocated ==2363417== ==2363417== LEAK SUMMARY: ==2363417== definitely lost: 0 bytes in 0 blocks ==2363417== indirectly lost: 0 bytes in 0 blocks ==2363417== possibly lost: 0 bytes in 0 blocks ==2363417== still reachable: 56 bytes in 3 blocks ==2363417== suppressed: 835,508 bytes in 11,670 blocks ==2363417== Reachable blocks (those to which a pointer was found) are not shown. ==2363417== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==2363417== ==2363417== For lists of detected and suppressed errors, rerun with: -s ==2363417== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)