==2389566== Memcheck, a memory error detector ==2389566== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==2389566== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==2389566== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCellCycleModelOdeSolver -malloc_debug -malloc_dump -memory_info ==2389566== Parent PID: 2388325 ==2389566== ==2389566== ==2389566== FILE DESCRIPTORS: 9 open (3 std) at exit. ==2389566== Open file descriptor 12: ==2389566== at 0xEF9E07D: pipe (pipe.c:29) ==2389566== by 0x196AC07D: ??? ==2389566== by 0x13C5B4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2389566== by 0xEBEB418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2389566== by 0xEB84D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2389566== by 0xD87BD38: PetscInitialize (pinit.c:924) ==2389566== by 0xD6E22DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2389566== by 0xD6E232D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2389566== by 0x162DFB: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==2389566== by 0x15D597: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2389566== by 0x1604CA: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2389566== by 0x16036A: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2389566== by 0x160A01: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2389566== by 0x15B575: main (TestCellCycleModelOdeSolver.cpp:19) ==2389566== ==2389566== Open file descriptor 8: /dev/shm/open_mpi.0000 ==2389566== at 0xEFA2A1C: __open_nocancel (open64_nocancel.c:39) ==2389566== by 0xEF26BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==2389566== by 0xD71D822: ??? ==2389566== by 0xD71D96F: ??? ==2389566== by 0x13D006DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2389566== by 0x13D00938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2389566== by 0x13CB6922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2389566== by 0x13C5B2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2389566== by 0xEBEB418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2389566== by 0xEB84D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2389566== by 0xD87BD38: PetscInitialize (pinit.c:924) ==2389566== by 0xD6E22DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2389566== by 0xD6E232D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2389566== by 0x162DFB: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==2389566== by 0x15D597: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2389566== by 0x1604CA: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2389566== by 0x16036A: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2389566== by 0x160A01: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2389566== by 0x15B575: main (TestCellCycleModelOdeSolver.cpp:19) ==2389566== ==2389566== Open file descriptor 115: ==2389566== ==2389566== ==2389566== Open file descriptor 112: ==2389566== ==2389566== ==2389566== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCellCycleModelOdeSolver_valgrind.txt ==2389566== ==2389566== ==2389566== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==2389566== ==2389566== ==2389566== ==2389566== HEAP SUMMARY: ==2389566== in use at exit: 835,633 bytes in 11,677 blocks ==2389566== total heap usage: 555,798 allocs, 544,121 frees, 1,546,503,701 bytes allocated ==2389566== ==2389566== LEAK SUMMARY: ==2389566== definitely lost: 0 bytes in 0 blocks ==2389566== indirectly lost: 0 bytes in 0 blocks ==2389566== possibly lost: 0 bytes in 0 blocks ==2389566== still reachable: 56 bytes in 3 blocks ==2389566== suppressed: 835,577 bytes in 11,674 blocks ==2389566== Reachable blocks (those to which a pointer was found) are not shown. ==2389566== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==2389566== ==2389566== For lists of detected and suppressed errors, rerun with: -s ==2389566== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)