==2444624== Memcheck, a memory error detector ==2444624== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==2444624== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==2444624== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestSingleOdeWntCellCycleModel -malloc_debug -malloc_dump -memory_info ==2444624== Parent PID: 2429088 ==2444624== ==2444624== ==2444624== FILE DESCRIPTORS: 9 open (3 std) at exit. ==2444624== Open file descriptor 12: ==2444624== at 0x1006207D: pipe (pipe.c:29) ==2444624== by 0x1A6DC07D: ??? ==2444624== by 0x1483A4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2444624== by 0xF96A418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2444624== by 0xF903D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2444624== by 0xE5FAD38: PetscInitialize (pinit.c:924) ==2444624== by 0xE462153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2444624== by 0xE4621A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2444624== by 0x18BB23: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==2444624== by 0x184159: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2444624== by 0x187468: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2444624== by 0x187363: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2444624== by 0x187977: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2444624== by 0x181D95: main (TestSingleOdeWntCellCycleModel.cpp:18) ==2444624== ==2444624== Open file descriptor 8: /dev/shm/open_mpi.0000 ==2444624== at 0x10066A1C: __open_nocancel (open64_nocancel.c:39) ==2444624== by 0xFFEABCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==2444624== by 0xE49C822: ??? ==2444624== by 0xE49C96F: ??? ==2444624== by 0x148DF6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2444624== by 0x148DF938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2444624== by 0x14895922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2444624== by 0x1483A2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2444624== by 0xF96A418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2444624== by 0xF903D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2444624== by 0xE5FAD38: PetscInitialize (pinit.c:924) ==2444624== by 0xE462153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2444624== by 0xE4621A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2444624== by 0x18BB23: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==2444624== by 0x184159: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2444624== by 0x187468: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2444624== by 0x187363: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2444624== by 0x187977: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2444624== by 0x181D95: main (TestSingleOdeWntCellCycleModel.cpp:18) ==2444624== ==2444624== Open file descriptor 115: ==2444624== ==2444624== ==2444624== Open file descriptor 112: ==2444624== ==2444624== ==2444624== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestSingleOdeWntCellCycleModel_valgrind.txt ==2444624== ==2444624== ==2444624== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==2444624== ==2444624== ==2444624== ==2444624== HEAP SUMMARY: ==2444624== in use at exit: 835,793 bytes in 11,679 blocks ==2444624== total heap usage: 270,950 allocs, 259,271 frees, 1,558,992,003 bytes allocated ==2444624== ==2444624== LEAK SUMMARY: ==2444624== definitely lost: 0 bytes in 0 blocks ==2444624== indirectly lost: 0 bytes in 0 blocks ==2444624== possibly lost: 0 bytes in 0 blocks ==2444624== still reachable: 200 bytes in 5 blocks ==2444624== suppressed: 835,593 bytes in 11,674 blocks ==2444624== Reachable blocks (those to which a pointer was found) are not shown. ==2444624== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==2444624== ==2444624== For lists of detected and suppressed errors, rerun with: -s ==2444624== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)