==2444676== Memcheck, a memory error detector ==2444676== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==2444676== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==2444676== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestVanLeeuwen2009WntSwatCellCycleOdeSystem -malloc_debug -malloc_dump -memory_info ==2444676== Parent PID: 2429088 ==2444676== ==2444676== ==2444676== FILE DESCRIPTORS: 9 open (3 std) at exit. ==2444676== Open file descriptor 12: ==2444676== at 0x11B6E07D: pipe (pipe.c:29) ==2444676== by 0x1A6DC07D: ??? ==2444676== by 0x1589F4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2444676== by 0x11476418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2444676== by 0x1140FD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2444676== by 0x10106D38: PetscInitialize (pinit.c:924) ==2444676== by 0xFF6E153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2444676== by 0xFF6E1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2444676== by 0x136AAD: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==2444676== by 0x13133D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2444676== by 0x1340EC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2444676== by 0x133F8C: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2444676== by 0x134623: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2444676== by 0x12F765: main (TestVanLeeuwen2009WntSwatCellCycleOdeSystem.cpp:19) ==2444676== ==2444676== Open file descriptor 8: /dev/shm/open_mpi.0000 ==2444676== at 0x11B72A1C: __open_nocancel (open64_nocancel.c:39) ==2444676== by 0x11AF6BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==2444676== by 0xFFA8822: ??? ==2444676== by 0xFFA896F: ??? ==2444676== by 0x159446DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2444676== by 0x15944938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2444676== by 0x158FA922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2444676== by 0x1589F2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2444676== by 0x11476418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2444676== by 0x1140FD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2444676== by 0x10106D38: PetscInitialize (pinit.c:924) ==2444676== by 0xFF6E153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2444676== by 0xFF6E1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2444676== by 0x136AAD: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==2444676== by 0x13133D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2444676== by 0x1340EC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2444676== by 0x133F8C: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2444676== by 0x134623: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2444676== by 0x12F765: main (TestVanLeeuwen2009WntSwatCellCycleOdeSystem.cpp:19) ==2444676== ==2444676== Open file descriptor 115: ==2444676== ==2444676== ==2444676== Open file descriptor 112: ==2444676== ==2444676== ==2444676== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestVanLeeuwen2009WntSwatCellCycleOdeSystem_valgrind.txt ==2444676== ==2444676== ==2444676== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==2444676== ==2444676== ==2444676== ==2444676== HEAP SUMMARY: ==2444676== in use at exit: 835,617 bytes in 11,676 blocks ==2444676== total heap usage: 527,317 allocs, 515,641 frees, 1,748,818,981 bytes allocated ==2444676== ==2444676== LEAK SUMMARY: ==2444676== definitely lost: 0 bytes in 0 blocks ==2444676== indirectly lost: 0 bytes in 0 blocks ==2444676== possibly lost: 0 bytes in 0 blocks ==2444676== still reachable: 24 bytes in 2 blocks ==2444676== suppressed: 835,593 bytes in 11,674 blocks ==2444676== Reachable blocks (those to which a pointer was found) are not shown. ==2444676== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==2444676== ==2444676== For lists of detected and suppressed errors, rerun with: -s ==2444676== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)