==2048139== Memcheck, a memory error detector ==2048139== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==2048139== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==2048139== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCell -malloc_debug -malloc_dump -memory_info ==2048139== Parent PID: 2046931 ==2048139== ==2048139== ==2048139== FILE DESCRIPTORS: 9 open (3 std) at exit. ==2048139== Open file descriptor 12: ==2048139== at 0xED0826D: pipe (pipe.c:29) ==2048139== by 0x1976E07D: ??? ==2048139== by 0x138B34CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2048139== by 0xE957418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2048139== by 0xE8F0D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2048139== by 0xD5C4D38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==2048139== by 0xD4992DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2048139== by 0xD49932D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2048139== by 0x1291DB: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==2048139== by 0x123ECD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2048139== by 0x126DAA: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2048139== by 0x126C4A: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2048139== by 0x1272E1: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2048139== by 0x1222F5: main (TestCell.cpp:19) ==2048139== ==2048139== Open file descriptor 8: /dev/shm/open_mpi.0000 ==2048139== at 0xED0CC0C: __open_nocancel (open64_nocancel.c:39) ==2048139== by 0xEC90BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==2048139== by 0xE84E822: ??? ==2048139== by 0xE84E96F: ??? ==2048139== by 0x139586DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2048139== by 0x13958938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2048139== by 0x1390E922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2048139== by 0x138B32DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2048139== by 0xE957418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2048139== by 0xE8F0D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2048139== by 0xD5C4D38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==2048139== by 0xD4992DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2048139== by 0xD49932D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2048139== by 0x1291DB: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==2048139== by 0x123ECD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2048139== by 0x126DAA: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2048139== by 0x126C4A: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2048139== by 0x1272E1: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2048139== by 0x1222F5: main (TestCell.cpp:19) ==2048139== ==2048139== Open file descriptor 115: ==2048139== ==2048139== ==2048139== Open file descriptor 112: ==2048139== ==2048139== ==2048139== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCell_valgrind.txt ==2048139== ==2048139== ==2048139== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==2048139== ==2048139== ==2048139== ==2048139== HEAP SUMMARY: ==2048139== in use at exit: 858,089 bytes in 12,110 blocks ==2048139== total heap usage: 5,191,995 allocs, 5,179,885 frees, 2,023,648,886 bytes allocated ==2048139== ==2048139== LEAK SUMMARY: ==2048139== definitely lost: 0 bytes in 0 blocks ==2048139== indirectly lost: 0 bytes in 0 blocks ==2048139== possibly lost: 0 bytes in 0 blocks ==2048139== still reachable: 184 bytes in 4 blocks ==2048139== suppressed: 857,905 bytes in 12,106 blocks ==2048139== Reachable blocks (those to which a pointer was found) are not shown. ==2048139== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==2048139== ==2048139== For lists of detected and suppressed errors, rerun with: -s ==2048139== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 19 from 19)