==2058094== Memcheck, a memory error detector ==2058094== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==2058094== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==2058094== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestCheckpointing -malloc_debug -malloc_dump -memory_info ==2058094== Parent PID: 2046931 ==2058094== ==2058094== ==2058094== FILE DESCRIPTORS: 9 open (3 std) at exit. ==2058094== Open file descriptor 12: ==2058094== at 0xA47F26D: pipe (pipe.c:29) ==2058094== by 0x143EB07D: ??? ==2058094== by 0xFB8D4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2058094== by 0xBB77418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2058094== by 0xBB10D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2058094== by 0xA807D38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==2058094== by 0xA0AB2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2058094== by 0xA0AB32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2058094== by 0x123956: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==2058094== by 0x11E4B3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2058094== by 0x120CD0: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2058094== by 0x120BCB: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2058094== by 0x1211DF: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2058094== by 0x11CCB5: main (TestCheckpointing.cpp:18) ==2058094== ==2058094== Open file descriptor 8: /dev/shm/open_mpi.0000 ==2058094== at 0xA483C0C: __open_nocancel (open64_nocancel.c:39) ==2058094== by 0xA407BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==2058094== by 0xA0E0822: ??? ==2058094== by 0xA0E096F: ??? ==2058094== by 0xFC326DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2058094== by 0xFC32938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2058094== by 0xFBE8922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2058094== by 0xFB8D2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2058094== by 0xBB77418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2058094== by 0xBB10D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2058094== by 0xA807D38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==2058094== by 0xA0AB2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2058094== by 0xA0AB32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2058094== by 0x123956: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==2058094== by 0x11E4B3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2058094== by 0x120CD0: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2058094== by 0x120BCB: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2058094== by 0x1211DF: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2058094== by 0x11CCB5: main (TestCheckpointing.cpp:18) ==2058094== ==2058094== Open file descriptor 115: ==2058094== ==2058094== ==2058094== Open file descriptor 112: ==2058094== ==2058094== ==2058094== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCheckpointing_valgrind.txt ==2058094== ==2058094== ==2058094== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==2058094== ==2058094== ==2058094== ==2058094== HEAP SUMMARY: ==2058094== in use at exit: 858,425 bytes in 12,118 blocks ==2058094== total heap usage: 843,873 allocs, 831,755 frees, 1,648,235,817 bytes allocated ==2058094== ==2058094== LEAK SUMMARY: ==2058094== definitely lost: 0 bytes in 0 blocks ==2058094== indirectly lost: 0 bytes in 0 blocks ==2058094== possibly lost: 0 bytes in 0 blocks ==2058094== still reachable: 24 bytes in 2 blocks ==2058094== suppressed: 858,401 bytes in 12,116 blocks ==2058094== Reachable blocks (those to which a pointer was found) are not shown. ==2058094== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==2058094== ==2058094== For lists of detected and suppressed errors, rerun with: -s ==2058094== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 46 from 20)